RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZNF273Q14593 569 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 INPP5JQ15735 1006 aaPredicted RBP10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 MEX3BQ6ZN04 569 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 NOXO1Q8NFA2 376 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 SLC26A10Q8NG04 563 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 MITD1Q8WV92 249 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 PTX4Q96A99 478 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 GFI1Q99684 422 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 UNKLQ9H9P5 680 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 SPAG17Q6Q759 2223 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 SNRNP200O75643 2136 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 DXOO77932 396 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 CRHP06850 196 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 SLC25A4P12235 298 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 GLULP15104 373 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 MSR1P21757 451 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 DHODHQ02127 395 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 ARL5BQ96KC2 179 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 SMCO4Q9NRQ5 59 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 ATG12O94817 140 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 FPR2P25090 351 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 HMGN3Q15651 99 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 EXOSC6Q5RKV6 272 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 MAFIPQ8WZ33 124 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 OXGR1Q96P68 337 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 KLK13Q9UKR3 277 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 PIGLQ9Y2B2 252 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 MTCH2Q9Y6C9 303 aa10.41□□□□□ -0.74
UBE2D3-209ENST00000394804 IGLV1-36A0A0B4J1U3 117 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 PRR32B1ATL7 298 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 ZNF728P0DKX0 622 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 MMP16P51512 607 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 PPIAP62937 165 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 FBXW12Q6X9E4 464 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 KMT5CQ86Y97 462 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 C9orf40Q8IXQ3 194 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 ZNF721Q8TF20 911 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 ZNF286AQ9HBT8 521 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 RAB18Q9NP72 206 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 GHRLQ9UBU3 117 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 TTLL8A6PVC2 850 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 METTL12A8MUP2 240 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 SHISA8B8ZZ34 492 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 EIF1BO60739 113 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 JTBO76095 146 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 FKBP2P26885 142 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 CDAP32320 146 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 AFF3P51826 1226 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 MALLQ13021 153 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 MYBPHQ13203 477 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 MRPL22Q9NWU5 206 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 VSIG4Q9Y279 399 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 CD80P33681 288 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 GSK3AP49840 483 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 IL34Q6ZMJ4 242 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 RABEPKQ7Z6M1 372 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 OR1S1Q8NH92 325 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 RPS4Y2Q8TD47 263 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 DOCK9Q9BZ29 2069 aa10.4□□□□□ -0.74
UBE2D3-209ENST00000394804 PRR19A6NJB7 356 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 CDK2AP1O14519 115 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 SFT2D2O95562 160 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 P04436 131 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 HOXD4P09016 255 aaPredicted RBP10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 HLA-DOBP13765 273 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 FOLR1P15328 257 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 GLB1P16278 677 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 SYT13Q7L8C5 426 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 NAA40Q86UY6 237 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 ZNF695Q8IW36 515 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 LRRC75AQ8NAA5 344 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 OR14L1PQ8NHC6 308 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 RNF133Q8WVZ7 376 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 ARHGAP5-AS1Q96IT6 56 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 GUCD1Q96NT3 240 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 UTP23Q9BRU9 249 aaKnown RBP10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 ZNF2Q9BSG1 426 aaPredicted RBP10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 KLHL13Q9P2N7 655 aa10.4□□□□□ -0.75
UBE2D3-209ENST00000394804 DENND4CQ5VZ89 1909 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 FGF2P09038 288 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 RPL12P30050 165 aaKnown RBP10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 CNTNAP3Q9BZ76 1288 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 UCK1Q9HA47 277 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 KPTNQ9Y664 436 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 KIF26BQ2KJY2 2108 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 A0A087WV48 116 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 IGHV1OR21-1A0A087WYE8 117 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 TMEM218A2RU14 115 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 GP1BAP07359 652 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 VSIG8P0DPA2 414 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 FCGR2CP31995 323 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 PJVKQ0ZLH3 352 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 STX12Q86Y82 276 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 SLC38A9Q8NBW4 561 aa10.39□□□□□ -0.75
UBE2D3-209ENST00000394804 DUSP23Q9BVJ7 150 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms