RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 C19orf25Q9UFG5 118 aaPredicted RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 GPN3Q9UHW5 284 aaPredicted RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 MRPS28Q9Y2Q9 187 aaKnown RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 PTRH2Q9Y3E5 179 aaKnown RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 TMEM14DPA8MWL7 114 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 SULT2B1O00204 365 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 HTR3BO95264 441 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 QDPRP09417 244 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF20P17024 532 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 CASRP41180 1078 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 IL11RAQ14626 422 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 KCNRGQ8N5I3 272 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 NOXO1Q8NFA2 376 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 ARHGAP5-AS1Q96IT6 56 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 RASL10BQ96S79 203 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 PNRC2Q9NPJ4 139 aaKnown RBP11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 RASL12Q9NYN1 266 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 AHCTF1Q8WYP5 2266 aa11.89□□□□□ -0.51
GTF2F1-201ENST00000394456 ONECUT2O95948 504 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 MGMTP16455 207 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 RAB6AP20340 208 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 SERPINF1P36955 418 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC23A3Q6PIS1 610 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 WDSUB1Q8N9V3 476 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 OR52H1Q8NGJ2 320 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 OR5D14Q8NGL3 314 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 RRNAD1Q96FB5 475 aaKnown RBP11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF581Q9P0T4 197 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 B3GALT5Q9Y2C3 310 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 WIF1Q9Y5W5 379 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 MYO7BQ6PIF6 2116 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 C5orf51A6NDU8 294 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 FAM74A7A6NL05 159 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF208O43345 1280 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 KLK3P07288 261 aaPredicted RBP11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 UMODP07911 640 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 TAGLNQ01995 201 aaKnown RBP11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 PCOLCEQ15113 449 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 FAM74A3Q4VXF1 159 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 CLVS2Q5SYC1 327 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF529Q6P280 563 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 CRIP3Q6Q6R5 217 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 DEGS2Q6QHC5 323 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 TMEM200AQ86VY9 491 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 OR4K15Q8NH41 348 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 MITD1Q8WV92 249 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 TMEM230Q96A57 120 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 PRRT1Q99946 306 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 SLCO5A1Q9H2Y9 848 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 H0YIZ8 118 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 CRTAPO75718 401 aaPredicted RBP11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 BPNT1O95861 308 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 HCKP08631 526 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 CX3CR1P49238 355 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 DUSP3P51452 185 aaPredicted RBP11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 ZFP36L1Q07352 338 aaKnown RBP11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 SGCAQ16586 387 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 BPIFCQ8NFQ6 507 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 FBXW5Q969U6 566 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 LYZL4Q96KX0 146 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 ADAT1Q9BUB4 502 aaKnown RBP11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 SESN1Q9Y6P5 492 aa11.88□□□□□ -0.51
GTF2F1-201ENST00000394456 KNTC1P50748 2209 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 OR5H15A6NDH6 313 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 MSGN1A6NI15 193 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 CDC14BO60729 498 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF205O95201 554 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 IL2RAP01589 272 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 DBHP09172 617 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 PGAM2P15259 253 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 CLDN17P56750 224 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF273Q14593 569 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 MEF2DQ14814 521 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 C5orf46Q6UWT4 87 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ARMC10Q8N2F6 343 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 LRRC18Q8N456 261 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF283Q8N7M2 679 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 OR2AJ1Q8NGZ0 328 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC22A8Q8TCC7 542 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF837Q96EG3 531 aaPredicted RBP11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 UCN2Q96RP3 112 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ST6GALNAC5Q9BVH7 336 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF416Q9BWM5 594 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 C12orf4Q9NQ89 552 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC2A8Q9NY64 477 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 COMMD9Q9P000 198 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 KANTRA0A1W2PQU2 76 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF878C9JN71 531 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 F5H0A9 414 aaPredicted RBP11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 BCL2L11O43521 198 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 PLATP00750 562 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 IGHG1P01857 330 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 IFNA6P05013 189 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 STARP49675 285 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms