RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 OR3A3P47888 321 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 UBE2MP61081 183 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CXADRP78310 365 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ENDOGQ14249 297 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RAB35Q15286 201 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ATPAF1Q5TC12 328 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 H3F3CQ6NXT2 135 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DRAM2Q6UX65 266 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 C3P1Q6ZMU1 363 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DBX2Q6ZNG2 339 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 NAXDQ8IW45 347 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ARRDC1Q8N5I2 433 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ESX1Q8N693 406 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RHBDD1Q8TEB9 315 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 NUDCD2Q8WVJ2 157 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 NABP1Q96AH0 204 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RAB3CQ96E17 227 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF799Q96GE5 643 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SFXN2Q96NB2 322 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SCGB3A2Q96PL1 93 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF385AQ96PM9 386 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CITED4Q96RK1 184 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RBM24Q9BX46 236 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 FAM117AQ9C073 453 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CHST5Q9GZS9 411 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 FXYD6Q9H0Q3 95 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 LPAR5Q9H1C0 372 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ZMAT3Q9HA38 289 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 PLEK2Q9NYT0 353 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 COMMD9Q9P000 198 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ABI3Q9P2A4 366 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 MYEF2Q9P2K5 600 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 KCNN3Q9UGI6 736 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 KIF25Q9UIL4 384 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ZNF391Q9UJN7 358 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 BOKQ9UMX3 212 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 NOP16Q9Y3C1 178 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 AUP1Q9Y679 476 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 MED12Q93074 2177 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 NCKAP5O14513 1909 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 A0A1B0GW55 424 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RFPL4AA6NLU0 287 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 F5H5K5 113 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RFPL4AL1F8VTS6 287 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 G3V3Y1 287 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SMAD9O15198 467 aaKnown RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ARPC5O15511 151 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SGCEO43556 437 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CRTAPO75718 401 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 MPC2O95563 127 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 FCER2P06734 321 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CST2P09228 141 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DUX4L2P0CJ85 424 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DUX4L3P0CJ86 424 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DUX4L4P0CJ87 422 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DUX4L5P0CJ88 424 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DUX4L6P0CJ89 424 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DUX4L7P0CJ90 424 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RPA2P15927 270 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 GNB3P16520 340 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 NAT1P18440 290 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 KLK2P20151 261 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 POU3F2P20265 443 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 OR3A4PP47883 348 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CYB561P49447 251 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 H2BFSP57053 126 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CARD18P57730 90 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DHRS2Q13268 280 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 PPA1Q15181 289 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CSRP2Q16527 193 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ACER2Q5QJU3 275 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM164Q5U3C3 297 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 FAM27BQ5VT28 67 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 B3GNTL1Q67FW5 361 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ABLIM2Q6H8Q1 611 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 JMJD6Q6NYC1 403 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 Q6ZSR3 168 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 RAB11FIP2Q7L804 512 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 LYG2Q86SG7 212 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SLC25A42Q86VD7 318 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 TMEM17Q86X19 198 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 OR5M8Q8NGP6 311 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 OR13C8Q8NGS7 320 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 OR2V1Q8NHB1 315 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CPT1CQ8TCG5 803 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SSC4DQ8WTU2 575 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CT55Q8WUE5 264 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 CPNE4Q96A23 557 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 LIN37Q96GY3 246 aaPredicted RBP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 LOXL4Q96JB6 756 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 UCN2Q96RP3 112 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 PHB2Q99623 299 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SLC6A7Q99884 636 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 SELENOIQ9C0D9 397 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMAD1-202ENST00000394092 B4GALT7Q9UBV7 327 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 DUX4Q9UBX2 424 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 ANAPC10Q9UM13 185 aa6.33□□□□□ -1.4
SMAD1-202ENST00000394092 TECTAO75443 2155 aa6.32□□□□□ -1.4
SMAD1-202ENST00000394092 DOCK10Q96BY6 2186 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms