RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 SRSF5Q13243 272 aaKnown RBP20.19■□□□□ 0.82
RARA-202ENST00000394081 C1orf140Q5VVS0 124 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 COX15Q7KZN9 410 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 OR13G1Q8NGZ3 307 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 ADAT3Q96EY9 351 aaPredicted RBP20.19■□□□□ 0.82
RARA-202ENST00000394081 B3GALT5Q9Y2C3 310 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 A0A1W2PQD3 144 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 NSA2O95478 260 aaKnown RBP20.19■□□□□ 0.82
RARA-202ENST00000394081 TTRP02766 147 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 CTNNB1P35222 781 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 ZNF84P51523 738 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 SPEM2Q0P670 501 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 MIDNQ504T8 468 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 PLAC9Q5JTB6 97 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 ADAM5Q6NVV9 412 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 ZNF101Q8IZC7 436 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 PRRX2Q99811 253 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 KLHDC3Q9BQ90 382 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 NICN1Q9BSH3 213 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 PBDC1Q9BVG4 233 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 FAM60AQ9NP50 221 aa20.19■□□□□ 0.82
RARA-202ENST00000394081 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.19■□□□□ 0.82
RARA-202ENST00000394081 A0A0A6YYD4 124 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 A8MVM7 634 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 HCRTR2O43614 444 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 MPZL1O95297 269 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 SLC34A2O95436 690 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 POLR2HP52434 150 aaKnown RBP20.18■□□□□ 0.82
RARA-202ENST00000394081 TMEM33P57088 247 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 OR2A2Q6IF42 318 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 ZNF761Q86XN6 746 aaPredicted RBP20.18■□□□□ 0.82
RARA-202ENST00000394081 FAM24BQ8N5W8 94 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 PNLDC1Q8NA58 520 aaKnown RBP20.18■□□□□ 0.82
RARA-202ENST00000394081 S100A13Q99584 98 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 AMDHD2Q9Y303 409 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 STRAPQ9Y3F4 350 aaKnown RBP20.18■□□□□ 0.82
RARA-202ENST00000394081 CACNA1IQ9P0X4 2223 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 TRBV23-1A0A0A0MS06 115 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 AMY2BP19961 511 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 LMO1P25800 156 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 ID4P47928 161 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 SLC37A1P57057 533 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 CAPNS2Q96L46 248 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 YPEL4Q96NS1 127 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 RSRP1Q9BUV0 290 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 NXF5Q9H1B4 397 aaKnown RBP20.18■□□□□ 0.82
RARA-202ENST00000394081 SLC35B3Q9H1N7 401 aa20.18■□□□□ 0.82
RARA-202ENST00000394081 UMAD1C9J7I0 102 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 IFNA2P01563 188 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 OR3A2P47893 321 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 CDX1P47902 265 aaPredicted RBP20.17■□□□□ 0.82
RARA-202ENST00000394081 GPM6BQ13491 265 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 TDGQ13569 410 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 IAH1Q2TAA2 248 aaPredicted RBP20.17■□□□□ 0.82
RARA-202ENST00000394081 DNLZQ5SXM8 178 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 LFNGQ8NES3 379 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 C1orf147Q96MC9 270 aaPredicted RBP20.17■□□□□ 0.82
RARA-202ENST00000394081 TMEM131Q92545 1883 aa20.17■□□□□ 0.82
RARA-202ENST00000394081 NPIPB13A6NJU9 1138 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 NPIPB4C9JG80 1138 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 CDC14BO60729 498 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 SFTPBP07988 381 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 RBMXP38159 391 aaKnown RBP20.16■□□□□ 0.82
RARA-202ENST00000394081 KLHL24Q6TFL4 600 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 FBRSQ9HAH7 460 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 PRR13Q9NZ81 148 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 MRPS28Q9Y2Q9 187 aaKnown RBP20.16■□□□□ 0.82
RARA-202ENST00000394081 BORCS7-ASMTA0A0B4J1R7 106 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 LOC101059948A0A1B0GTJ6 334 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 C17orf105B2RV13 164 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 FOXK1P85037 733 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 ERV3-1Q14264 604 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 TGIF1Q15583 401 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 ZNF239Q16600 458 aaKnown RBP20.16■□□□□ 0.82
RARA-202ENST00000394081 DEFB110Q30KQ9 67 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 GLIPR1L1Q6UWM5 242 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 HEPN1Q6WQI6 88 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 ZNF565Q8N9K5 539 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 ZNF248Q8NDW4 579 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 OR13C9Q8NGT0 318 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 FNDC9Q8TBE3 224 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 PFDN5Q99471 154 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 TMEM59Q9BXS4 323 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 PBOV1Q9GZY1 135 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 RAB33BQ9H082 229 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 MOB1AQ9H8S9 216 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 C14orf166Q9Y224 244 aaKnown RBP20.16■□□□□ 0.82
RARA-202ENST00000394081 ALPK2Q86TB3 2170 aa20.16■□□□□ 0.82
RARA-202ENST00000394081 TMED7-TICAM2A0A0A6YYA0 188 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 CTSBP07858 339 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 ACRP10323 421 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 PI3P19957 117 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 C19orf47Q8N9M1 422 aaKnown RBP20.15■□□□□ 0.82
RARA-202ENST00000394081 GINS3Q9BRX5 216 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 URM1Q9BTM9 101 aaKnown RBP20.15■□□□□ 0.82
RARA-202ENST00000394081 EIF5A2Q9GZV4 153 aaKnown RBP20.15■□□□□ 0.82
RARA-202ENST00000394081 KCNJ16Q9NPI9 418 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 FREM3P0C091 2139 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 KIR2DS5A0A0G2JLQ3 304 aa20.15■□□□□ 0.82
RARA-202ENST00000394081 A0A0G2JNG1 304 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms