RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 KLHDC2Q9Y2U9 406 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 SONP18583 2426 aaKnown RBP10.67□□□□□ -0.7
GGPS1-203ENST00000391855 PPIAL4EA0A075B759 164 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 PPIAL4CA0A0B4J2A2 164 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 A0A0G2JMP0 313 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 A0A0X1KG70 313 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 ZNF670-ZNF695F2Z2N8 137 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 PPIAL4DF5H284 164 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 J3QLI3 93 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 SBK2P0C263 348 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 PPIAL4FP0DN26 164 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 GATA3P23771 443 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 GNALP38405 381 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 RIDAP52758 137 aaKnown RBP10.67□□□□□ -0.7
GGPS1-203ENST00000391855 EGR3Q06889 387 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 SCGB2A2Q13296 93 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 MAB21L1Q13394 359 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 ZMYND11Q15326 602 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 OR8B8Q15620 311 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 SLC35F2Q8IXU6 374 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 OR4M2Q8NGB6 313 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 RFKQ969G6 155 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 PATZ1Q9HBE1 687 aaKnown RBP10.67□□□□□ -0.7
GGPS1-203ENST00000391855 ADGRL4Q9HBW9 690 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 S100A14Q9HCY8 104 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 BRD7Q9NPI1 651 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 CLN6Q9NWW5 311 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 IMPAD1Q9NX62 359 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 DCAF16Q9NXF7 216 aa10.67□□□□□ -0.7
GGPS1-203ENST00000391855 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-203ENST00000391855 ABCA2Q9BZC7 2435 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 NIPBLQ6KC79 2804 aaeCLIP10.66□□□□□ -0.7
GGPS1-203ENST00000391855 A0A0U1RQV5 110 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 C5orf63A6NC05 138 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 F5H0A9 414 aaPredicted RBP10.66□□□□□ -0.7
GGPS1-203ENST00000391855 M0R129 80 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 PNPP00491 289 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 ATP6V1B1P15313 513 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 ANOS1P23352 680 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 HTR1FP30939 366 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 GSK3AP49840 483 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 KCNJ8Q15842 424 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 GFOD2Q3B7J2 385 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 ZNF322Q6U7Q0 402 aaPredicted RBP10.66□□□□□ -0.7
GGPS1-203ENST00000391855 PQLC1Q8N2U9 271 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 OR8B12Q8NGG6 310 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 ZNF420Q8TAQ5 688 aaPredicted RBP10.66□□□□□ -0.7
GGPS1-203ENST00000391855 FAM81AQ8TBF8 368 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 STMN2Q93045 179 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 HRASLS5Q96KN8 279 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 LPAR2Q9HBW0 351 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 TRIM36Q9NQ86 728 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 IKZF2Q9UKS7 526 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 LRCH1Q9Y2L9 728 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 PPIAL4AQ9Y536 164 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 MPC1Q9Y5U8 109 aa10.66□□□□□ -0.7
GGPS1-203ENST00000391855 TMEM269A0A1B0GVZ9 245 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 ANXA2P2A6NMY6 339 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 A8MXK9 166 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 PLPP2O43688 288 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 FAM20BO75063 409 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 CYB5R3P00387 301 aaPredicted RBP10.65□□□□□ -0.7
GGPS1-203ENST00000391855 POLR2IP36954 125 aaKnown RBP10.65□□□□□ -0.7
GGPS1-203ENST00000391855 SRP14P37108 136 aaKnown RBP10.65□□□□□ -0.7
GGPS1-203ENST00000391855 CXCR4P61073 352 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 IL5RAQ01344 420 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 ESCO2Q56NI9 601 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 PRAMEF6Q5VXH4 476 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 MEDAGQ5VYS4 303 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 CBR4Q8N4T8 237 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 G6PC2Q9NQR9 355 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 FAM206AQ9NX38 181 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 ZNF319Q9P2F9 582 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 RNF7Q9UBF6 113 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 MIOXQ9UGB7 285 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 NUFIP1Q9UHK0 495 aaKnown RBP10.65□□□□□ -0.7
GGPS1-203ENST00000391855 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.65□□□□□ -0.7
GGPS1-203ENST00000391855 COPS3Q9UNS2 423 aa10.65□□□□□ -0.7
GGPS1-203ENST00000391855 POLR3KQ9Y2Y1 108 aaPredicted RBP10.65□□□□□ -0.7
GGPS1-203ENST00000391855 SNTNA6NMZ2 147 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 CEACAM18A8MTB9 384 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 CST4P01036 141 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 KRT8P05787 483 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 OR2T7P0C7T2 308 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 RPS2P15880 293 aaKnown RBP10.64□□□□□ -0.71
GGPS1-203ENST00000391855 PMELP40967 661 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 ZSCAN26Q16670 478 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 ZNF404Q494X3 552 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 SLC25A30Q5SVS4 291 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 DCAF12L2Q5VW00 463 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 NLRC3Q7RTR2 1065 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 BCDIN3DQ7Z5W3 292 aaKnown RBP10.64□□□□□ -0.71
GGPS1-203ENST00000391855 OR51G2Q8NGK0 314 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 OR2T27Q8NH04 317 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 MICU1Q9BPX6 476 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 RTL8AQ9BWD3 113 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 PAPOLGQ9BWT3 736 aaKnown RBP10.64□□□□□ -0.71
GGPS1-203ENST00000391855 TMEM165Q9HC07 324 aa10.64□□□□□ -0.71
GGPS1-203ENST00000391855 ZNF816-ZNF321PA0A0X1KG74 233 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms