RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 IGKV1-8A0A0C4DH67 115 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 A0A1W2PPE3 182 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SMCO3A2RU48 225 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 IZUMO1RA6ND01 250 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SMCO2A6NFE2 343 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 G3V3Q6 166 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 H0YCG3 227 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 K7EMT4 169 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 M0R1X1 148 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 RAB29O14966 203 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SMPD2O60906 423 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 MTX2O75431 263 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 CRTAPO75718 401 aaPredicted RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SMC2O95347 1197 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 FGFR1OPO95684 399 aaKnown RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 TGM6O95932 706 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 PTMAP06454 111 aaKnown RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SLC35G6P0C7Q6 338 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 PRSS3P35030 304 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 NSG1P42857 185 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 OR1G1P47890 313 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 RGS6P49758 472 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 ACLYP53396 1101 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 AIF1P55008 147 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 FOXA1P55317 472 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 CCL23P55773 120 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 CMC4P56277 68 aaPredicted RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 PLP1P60201 277 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 ATP5G2Q06055 141 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 BST2Q10589 180 aaKnown RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 GK3PQ14409 553 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 ZNF726P1Q15940 193 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SSX2Q16385 188 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 HHATQ5VTY9 493 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 TTC19Q6DKK2 380 aaPredicted RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SLC25A24Q6NUK1 477 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 C16orf87Q6PH81 154 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 WDR59Q6PJI9 974 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 C12orf54Q6X4T0 127 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 OTUD6AQ7L8S5 288 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 CDH26Q8IXH8 852 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 IQCKQ8N0W5 287 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 UBE2J2Q8N2K1 259 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 RPRMLQ8N4K4 120 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 NECAB1Q8N987 351 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SDR9C7Q8NEX9 313 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 BPIFB6Q8NFQ5 453 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 OR8K3Q8NH51 312 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SFXN5Q8TD22 340 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 NRBF2Q96F24 287 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 MRPL48Q96GC5 212 aaKnown RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SLC41A3Q96GZ6 507 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SNF8Q96H20 258 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 Q96MT0 163 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 ZNF75AQ96N20 296 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 OR4K3Q96R72 315 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 TEAD3Q99594 435 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SLC29A1Q99808 456 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 ANKRD60Q9BZ19 345 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 VCX2Q9H322 139 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 VSIRQ9H7M9 311 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 ZNF442Q9H7R0 627 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 CYP3A43Q9HB55 503 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 MRM3Q9HC36 420 aaKnown RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 RRAGDQ9NQL2 400 aaPredicted RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 RGS18Q9NS28 235 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 SLC39A1Q9NY26 324 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 CLEC4AQ9UMR7 237 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 STARD10Q9Y365 291 aa0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 RPRD2Q5VT52 1461 aaKnown RBP0.35□□□□□ -2.35
SNORD28B-201ENST00000390993 FLG2Q5D862 2391 aaPredicted RBP0.34□□□□□ -2.35
SNORD28B-201ENST00000390993 A0A0G2JMP0 313 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 A0A0X1KG70 313 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 SIGLEC16A6NMB1 481 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 GGTLC3B5MD39 225 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 H3BQ85 93 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 LY6LH3BQJ8 138 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 SIRPB1O00241 398 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 NDUFAB1O14561 156 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 NDC80O14777 642 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 MYL12BO14950 172 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 RGS5O15539 181 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ENTPD6O75354 484 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 S1PR2O95136 353 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 LSM8O95777 96 aaKnown RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 PTHP01270 115 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 CDK1P06493 297 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 SERPINE2P07093 398 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ANXA5P08758 320 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 DESP17661 470 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 NCF2P19878 526 aaPredicted RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 OTX1P32242 354 aaPredicted RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 PFN2P35080 140 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 POLR2IP36954 125 aaKnown RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 TPMTP51580 245 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 EMP2P54851 167 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 RPS15AP62244 130 aaKnown RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 RPL23AP62750 156 aaKnown RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ELF3P78545 371 aaPredicted RBP0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms