RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CLLU1OSQ5K130 101 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 TET1Q8NFU7 2136 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 CDS1Q92903 461 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 TSLPQ969D9 159 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 MRGPRFQ96AM1 343 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 RASD2Q96D21 266 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 SLCO5A1Q9H2Y9 848 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 ZDHHC6Q9H6R6 413 aa13.44□□□□□ -0.26
VLDLR-202ENST00000382099 SRA1Q9HD15 236 aaKnown RBP13.44□□□□□ -0.26
VLDLR-202ENST00000382099 FRMPD3Q5JV73 1810 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TLCD2A6NGC4 264 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 KNG1P01042 644 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 OR5AC1P0C628 307 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 CCL20P78556 96 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 GLB1LQ6UWU2 654 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 Q6ZVL8 140 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 SLC16A11Q8NCK7 471 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 ADPRHL1Q8NDY3 354 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 RNASEH2CQ8TDP1 164 aaKnown RBP13.43□□□□□ -0.26
VLDLR-202ENST00000382099 METTL21AQ8WXB1 218 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TAC3Q9UHF0 121 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
VLDLR-202ENST00000382099 C1QTNF3-AMACRE9PGA6 284 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 SLC17A2O00624 439 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TMEM127O75204 238 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TRAPPC6AO75865 159 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 CDKN1BP46527 198 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TMEM128Q5BJH2 165 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 PRAMEF8Q5VWM4 474 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 PRAMEF7Q5VXH5 474 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 WDR25Q64LD2 544 aaPredicted RBP13.43□□□□□ -0.26
VLDLR-202ENST00000382099 FAM174AQ8TBP5 190 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 SDSLQ96GA7 329 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TBX15Q96SF7 602 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 FBRSQ9HAH7 460 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 B4GALT6Q9UBX8 382 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 ANKUB1A6NFN9 424 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 ZIC2O95409 532 aaPredicted RBP13.43□□□□□ -0.26
VLDLR-202ENST00000382099 NSA2O95478 260 aaKnown RBP13.43□□□□□ -0.26
VLDLR-202ENST00000382099 LCATP04180 440 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TAS2R31P59538 309 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 RAB35Q15286 201 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 C1orf194Q5T5A4 169 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 C1orf185Q5T7R7 199 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 SLC35E3Q7Z769 313 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 COX18Q8N8Q8 333 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 FBXO22Q8NEZ5 403 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 OR56A1Q8NGH5 318 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 OR6N2Q8NGY6 317 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 GPR119Q8TDV5 335 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 ALKBH3Q96Q83 286 aaPredicted RBP13.43□□□□□ -0.26
VLDLR-202ENST00000382099 TRIM2Q9C040 744 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 SLC25A13Q9UJS0 675 aa13.43□□□□□ -0.26
VLDLR-202ENST00000382099 POLR3KQ9Y2Y1 108 aaPredicted RBP13.43□□□□□ -0.26
VLDLR-202ENST00000382099 VWA8A3KMH1 1905 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 C1orf105O95561 183 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 SPINT3P49223 89 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 DUSP2Q05923 314 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 SPOCK1Q08629 439 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 ANKRD55Q3KP44 614 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 COL5A1-AS1Q5SY13 56 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 PLXDC2Q6UX71 529 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 ADIPOR2Q86V24 386 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 GINS3Q9BRX5 216 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 RAB18Q9NP72 206 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.42□□□□□ -0.26
VLDLR-202ENST00000382099 PAM16Q9Y3D7 125 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 WSB1Q9Y6I7 421 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 CEACAM1P13688 526 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 PPM1FP49593 454 aaPredicted RBP13.42□□□□□ -0.26
VLDLR-202ENST00000382099 NOVA1P51513 510 aaKnown RBP13.42□□□□□ -0.26
VLDLR-202ENST00000382099 TPGS2Q68CL5 300 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 ZFP62Q8NB50 900 aaPredicted RBP13.42□□□□□ -0.26
VLDLR-202ENST00000382099 OR13C3Q8NGS6 347 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 LYPD6BQ8NI32 183 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 SLC26A1Q9H2B4 701 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 KLHDC2Q9Y2U9 406 aa13.42□□□□□ -0.26
VLDLR-202ENST00000382099 C4orf47A7E2U8 309 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 CIDEAO60543 219 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 GSTP1P09211 210 aaKnown RBP13.41□□□□□ -0.26
VLDLR-202ENST00000382099 RND3P61587 244 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 KCNMB1Q16558 191 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 HIKESHIQ53FT3 197 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 OR9A4Q8NGU2 314 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 WFDC5Q8TCV5 224 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 ZNF775Q96BV0 537 aaPredicted RBP13.41□□□□□ -0.26
VLDLR-202ENST00000382099 ALG12Q9BV10 488 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 GLRX2Q9NS18 164 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 MRM2Q9UI43 246 aaKnown RBP13.41□□□□□ -0.26
VLDLR-202ENST00000382099 LAMP3Q9UQV4 416 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 ZFP30Q9Y2G7 519 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 HIF3AQ9Y2N7 669 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 MTCH2Q9Y6C9 303 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 IGLV3-16A0A075B6K0 115 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 ZNF860A6NHJ4 632 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 CLDN34H7C241 214 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 HSD17B6O14756 317 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 NDUFS4O43181 175 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 CD1AP06126 327 aa13.41□□□□□ -0.26
VLDLR-202ENST00000382099 DCAF7P61962 342 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms