RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 LRRC15Q8TF66 581 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 DDOQ99489 341 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 SLC22A13Q9Y226 551 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 TMPRSS2O15393 492 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 CBR3O75828 277 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ZGLP1P0C6A0 271 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 APOBEC1P41238 236 aaKnown RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 TCTN3Q6NUS6 607 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 SCGB1D4Q6XE38 83 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 LSRQ86X29 649 aaPredicted RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 MARC2Q969Z3 335 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 GPR45Q9Y5Y3 372 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 F2RL2O00254 374 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 TGOLN2O43493 480 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 SLC35B4Q969S0 331 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 SLC39A13Q96H72 371 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 TRAV39A0A0B4J263 110 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ACAA2P42765 397 aaKnown RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 EMDP50402 254 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 HMGN3Q15651 99 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ADGRG7Q96K78 797 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ZIC5Q96T25 663 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 MYH7BA7E2Y1 1941 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 KIR2DS1A0A191URI9 304 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 J3QR89 54 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ST8SIA3O43173 380 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 WNT1P04628 370 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 PRSS1P07477 247 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 SLC35E2P0CK97 266 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 KIR2DS4P43632 304 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ZNF252P-AS1Q0IIN9 211 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 SRSF5Q13243 272 aaKnown RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 KIR2DS1Q14954 304 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 MICBQ29980 383 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 OR2T2Q6IF00 324 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 RELL2Q8NC24 303 aaPredicted RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 VN1R2Q8NFZ6 395 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 MRPL37Q9BZE1 423 aaKnown RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 C10orf71Q711Q0 1435 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 KIAA1324LA8MWY0 1029 aaPredicted RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 OR4A8P0C604 315 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 FAHP16930 419 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 RNF113BQ8IZP6 322 aaKnown RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 TMEM116Q8NCL8 245 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 GNRHR2Q96P88 292 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 OR5V1Q9UGF6 321 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 LAMP3Q9UQV4 416 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 UBE2L6O14933 153 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 CABLES2Q9BTV7 478 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 HTR1DP28221 377 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 ZNF77Q15935 545 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 ABHD3Q8WU67 409 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 HSD3B7Q9H2F3 369 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 ST6GAL1P15907 406 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 PCGF1Q9BSM1 259 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 FGF22Q9HCT0 170 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 SNED1Q8TER0 1413 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 ORM1P02763 201 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 RFX2P48378 723 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 ADPRHL1Q8NDY3 354 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 OR52I2Q8NH67 350 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 MARCH1Q8TCQ1 289 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 C2CD4DB7Z1M9 353 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 TBX19O60806 448 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 MT-CO3P00414 261 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 NCR3LG1Q68D85 454 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 OR52B4Q8NGK2 314 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 K7ESF4 209 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 S100A11P31949 105 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 TGFBR1P36897 503 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 CBARPQ8N350 705 aaPredicted RBP11.24□□□□□ -0.61
CHD3-203ENST00000380358 ZNF416Q9BWM5 594 aa11.24□□□□□ -0.61
CHD3-203ENST00000380358 POU3F3P20264 500 aaPredicted RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 LGALS7P47929 136 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 SMIM21Q3B7S5 101 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ZNF628Q5EBL2 1059 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 FADS6Q8N9I5 356 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 TEX50A0A1B0GTY4 177 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 HSBP1O75506 76 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 BMP2P12643 396 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 SIX1Q15475 284 aaPredicted RBP11.23□□□□□ -0.61
CHD3-203ENST00000380358 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 CEACAM16Q2WEN9 425 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 LIPNQ5VXI9 398 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ABI3BPQ7Z7G0 1075 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 TMEM99Q8N816 258 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 ARRDC2Q8TBH0 407 aa11.23□□□□□ -0.61
CHD3-203ENST00000380358 WFDC5Q8TCV5 224 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms