RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SLC17A1Q14916 467 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 EXD3Q8N9H8 876 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 GPR148Q8TDV2 347 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ELP5Q8TE02 316 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 FAM71F1Q96KD3 344 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ZNF385AQ96PM9 386 aaKnown RBP9.59□□□□□ -0.87
NEDD9-201ENST00000379433 GFI1Q99684 422 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 STRADBQ9C0K7 418 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ALKBH4Q9NXW9 302 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 TAS2R4Q9NYW5 299 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 DHDHQ9UQ10 334 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 TMEM14AQ9Y6G1 99 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 TMEM82A0PJX8 343 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 IFITM5A6NNB3 132 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 KDM4BO94953 1096 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 P04436 131 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 SPINK2P20155 84 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 EFNB2P52799 333 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 Q0VFX4 171 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 NTRK2Q16620 822 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 RNFT1Q5M7Z0 435 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 TMEM69Q5SWH9 247 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 KCTD18Q6PI47 426 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-201ENST00000379433 OPN5Q6U736 354 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ZNF627Q7L945 461 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 PXKQ7Z7A4 578 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 BEST3Q8N1M1 668 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ZNF519Q8TB69 540 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 UPRTQ96BW1 309 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 SLC25A44Q96H78 314 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-201ENST00000379433 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 FARSAQ9Y285 508 aaKnown RBP9.59□□□□□ -0.87
NEDD9-201ENST00000379433 MSRB2Q9Y3D2 182 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ZNF292O60281 2723 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 AKAP13Q12802 2813 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 IGLV1-36A0A0B4J1U3 117 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 OR4C45A6NMZ5 311 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 SLC19A2O60779 497 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 TNFSF15O95150 251 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 UCHL1P09936 223 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 STAG3L2P0CL84 134 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 HSD11B1P28845 292 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 GUCA1AP43080 201 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-201ENST00000379433 KCNMB1Q16558 191 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 MISPQ8IVT2 679 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 SIAH3Q8IW03 269 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF679Q8IYX0 411 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 ARMC10Q8N2F6 343 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 SLC26A10Q8NG04 563 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 OR5D18Q8NGL1 313 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 RNF121Q9H920 327 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 CYSLTR2Q9NS75 346 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 FLVCR2Q9UPI3 526 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 RCE1Q9Y256 329 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 SLC5A6Q9Y289 635 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 NPIPA2E9PIF3 369 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 NPIPA3F8WFD2 350 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 EIF3GO75821 320 aaKnown RBP eCLIP9.58□□□□□ -0.88
NEDD9-201ENST00000379433 GUSBP08236 651 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF25P17030 456 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-201ENST00000379433 GDF1P27539 372 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 DAP3P51398 398 aaKnown RBP9.58□□□□□ -0.88
NEDD9-201ENST00000379433 PER3P56645 1201 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 IL10RAQ13651 578 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 AGAP6Q5VW22 663 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 NAA40Q86UY6 237 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 ZFP82Q8N141 532 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 CLRN3Q8NCR9 226 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 MFSD8Q8NHS3 518 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 STK35Q8TDR2 534 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 ASB10Q8WXI3 467 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF837Q96EG3 531 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-201ENST00000379433 AGAP4Q96P64 663 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 OR8B4Q96RC9 309 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 PIMREGQ9BSJ6 248 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 PDCD10Q9BUL8 212 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 HIF1ANQ9NWT6 349 aa9.58□□□□□ -0.88
NEDD9-201ENST00000379433 A0A0B4J293 547 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 SPAARA0A1B0GVQ0 90 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 A0A1W2PNU3 283 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 C9orf172C9J069 976 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 CYB5R3P00387 301 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 NQO2P16083 231 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ANOS1P23352 680 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 NHLH1Q02575 133 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ISXQ2M1V0 245 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 C2orf76Q3KRA6 126 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ACTBL2Q562R1 376 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 EMC4Q5J8M3 183 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 HES3Q5TGS1 186 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 NAXDQ8IW45 347 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 BHLHE23Q8NDY6 225 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 FGGYQ96C11 551 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF479Q96JC4 524 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 MRGPRX4Q96LA9 322 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 C4orf45Q96LM5 186 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 IMMP1LQ96LU5 166 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 SFXN2Q96NB2 322 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms