RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 CLDN25C9JDP6 229 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 GMDSO60547 372 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 TTRP02766 147 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 ACKR3P25106 362 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 PMELP40967 661 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 CD200P41217 278 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 SRP9P49458 86 aaKnown RBP17.32■□□□□ 0.36
TRIM13-203ENST00000378183 OR8G1Q15617 311 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 TTC23Q5W5X9 447 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 DHRSXQ8N5I4 330 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 CLDND2Q8NHS1 167 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 ZNF420Q8TAQ5 688 aaPredicted RBP17.32■□□□□ 0.36
TRIM13-203ENST00000378183 Q96MT0 163 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 ADAT1Q9BUB4 502 aaKnown RBP17.32■□□□□ 0.36
TRIM13-203ENST00000378183 NARFLQ9H6Q4 476 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 RNPEPL1Q9HAU8 725 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 TMEM106BQ9NUM4 274 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 PPP1R3CQ9UQK1 317 aa17.32■□□□□ 0.36
TRIM13-203ENST00000378183 MALRD1Q5VYJ5 2156 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 SNTNA6NMZ2 147 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 SULT1C4O75897 302 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 RPP14O95059 124 aaKnown RBP17.31■□□□□ 0.36
TRIM13-203ENST00000378183 KRT8P05787 483 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 ISL1P61371 349 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 IL5RAQ01344 420 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 SMN1Q16637 294 aaKnown RBP17.31■□□□□ 0.36
TRIM13-203ENST00000378183 LIPNQ5VXI9 398 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 MOGAT3Q86VF5 341 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 CELF2-AS1Q8N7Q2 184 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 YIPF7Q8N8F6 280 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 RNF166Q96A37 237 aaPredicted RBP17.31■□□□□ 0.36
TRIM13-203ENST00000378183 ADI1Q9BV57 179 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 ZNF391Q9UJN7 358 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 OR52A1Q9UKL2 312 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 RHBDD3Q9Y3P4 386 aa17.31■□□□□ 0.36
TRIM13-203ENST00000378183 LOC100289279A0A1B0GTE1 492 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 ANKRD30BLA7E2S9 258 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 LOC110117498-PIK3R3F6TDL0 507 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 GATA4P43694 442 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 LMO4P61968 165 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 SLC3A1Q07837 685 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 TP53I3Q53FA7 332 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 PRAMEF6Q5VXH4 476 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 CYB5R2Q6BCY4 276 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 CNIH3Q8TBE1 160 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 OR51E1Q8TCB6 317 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 RORBQ92753 470 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 HPS1Q92902 700 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 C1orf159Q96HA4 380 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 GPR84Q9NQS5 396 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 MRPS18AQ9NVS2 196 aaKnown RBP17.3■□□□□ 0.36
TRIM13-203ENST00000378183 SLC22A13Q9Y226 551 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 MYRFQ9Y2G1 1151 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 SNX5Q9Y5X3 404 aa17.3■□□□□ 0.36
TRIM13-203ENST00000378183 NSD1Q96L73 2696 aaPredicted RBP17.3■□□□□ 0.36
TRIM13-203ENST00000378183 DAPL1A0PJW8 107 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 TMEM178BH3BS89 294 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 PTBP3O95758 552 aaKnown RBP17.29■□□□□ 0.36
TRIM13-203ENST00000378183 GNAO1P09471 354 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 CAPGP40121 348 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 GZMKP49863 264 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 ACTC1P68032 377 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 ACTA1P68133 377 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 MPPED2Q15777 294 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 CDONQ4KMG0 1287 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 CATSPERDQ86XM0 798 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 KLBQ86Z14 1044 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 ELMOD2Q8IZ81 293 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 ACBD7Q8N6N7 88 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 CSNK2A3Q8NEV1 391 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 RAB1CQ92928 201 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 MSI2Q96DH6 328 aaKnown RBP17.29■□□□□ 0.36
TRIM13-203ENST00000378183 TIMD4Q96H15 378 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 ZNF649Q9BS31 505 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 MOB1AQ9H8S9 216 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 ACOXLQ9NUZ1 547 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 GTF2A1LQ9UNN4 478 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 NOP16Q9Y3C1 178 aaKnown RBP17.29■□□□□ 0.36
TRIM13-203ENST00000378183 RPL36Q9Y3U8 105 aaKnown RBP17.29■□□□□ 0.36
TRIM13-203ENST00000378183 PCDHGB1Q9Y5G3 927 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 NPTNQ9Y639 398 aa17.29■□□□□ 0.36
TRIM13-203ENST00000378183 CYB5R3P00387 301 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-203ENST00000378183 CST4P01036 141 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 IGHV2-70P01814 119 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 IGHA1P01876 353 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 ZNF16P17020 682 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-203ENST00000378183 C6orf52Q5T4I8 152 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 BCL2L15Q5TBC7 163 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 KRT74Q7RTS7 529 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 OR52I1Q8NGK6 324 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 GNG8Q9UK08 70 aa17.28■□□□□ 0.36
TRIM13-203ENST00000378183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.28■□□□□ 0.365e-9■■■■□ 20.9
TRIM13-203ENST00000378183 FN1P02751 2386 aaKnown RBP17.28■□□□□ 0.36
TRIM13-203ENST00000378183 A0A1B0GTI1 187 aa17.27■□□□□ 0.36
TRIM13-203ENST00000378183 FAM157AC9JC47 383 aa17.27■□□□□ 0.36
TRIM13-203ENST00000378183 H0YAE9 185 aa17.27■□□□□ 0.36
TRIM13-203ENST00000378183 FAM20BO75063 409 aa17.27■□□□□ 0.36
TRIM13-203ENST00000378183 PSMB10P40306 273 aa17.27■□□□□ 0.36
TRIM13-203ENST00000378183 OR12D2P58182 307 aa17.27■□□□□ 0.36
TRIM13-203ENST00000378183 RAB40BQ12829 278 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms