RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 DIMT1Q9UNQ2 313 aaKnown RBP11.25□□□□□ -0.61
CKAP2-202ENST00000378034 AKAP9Q99996 3911 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 ITPR3Q14573 2671 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 IGHV1-69-2A0A0G2JMI3 117 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 ANKRD30BLA7E2S9 258 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 LILRA1O75019 489 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 MTRF1O75570 445 aaKnown RBP11.24□□□□□ -0.61
CKAP2-202ENST00000378034 TTRP02766 147 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 FOSL1P15407 271 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 MAP2K3P46734 347 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 SRP9P49458 86 aaKnown RBP11.24□□□□□ -0.61
CKAP2-202ENST00000378034 TMEM33P57088 247 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 MZT1Q08AG7 82 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 KRT74Q7RTS7 529 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 CCDC54Q8NEL0 328 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 GGHQ92820 318 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 TMEM80Q96HE8 168 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 LYZL4Q96KX0 146 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF649Q9BS31 505 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 ABCB9Q9NP78 766 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 ACOXLQ9NUZ1 547 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 GTF2A1LQ9UNN4 478 aa11.24□□□□□ -0.61
CKAP2-202ENST00000378034 EXOSC1Q9Y3B2 195 aaKnown RBP11.24□□□□□ -0.61
CKAP2-202ENST00000378034 VWC2LB2RUY7 222 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 IFNL4K9M1U5 179 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 MLNRO43193 412 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 COL8A2P25067 703 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 PRSS12P56730 875 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 OR12D2P58182 307 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 OR8G1Q15617 311 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 C6orf141Q5SZD1 244 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 ZBTB37Q5TC79 503 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 OR51E1Q8TCB6 317 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 C4orf36Q96KX1 117 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 GPR84Q9NQS5 396 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 PSORS1C1Q9UIG5 152 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.23□□□□□ -0.61
CKAP2-202ENST00000378034 DHRS7CA6NNS2 312 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 J3QLW9 94 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CST4P01036 141 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 RPSAP08865 295 aaKnown RBP11.23□□□□□ -0.61
CKAP2-202ENST00000378034 LIMS3P0CW19 117 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 LIMS4P0CW20 117 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CD99P14209 185 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF19P17023 458 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 MYL12AP19105 171 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CA6P23280 308 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CD200P41217 278 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CCR9P51686 369 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 SLC3A1Q07837 685 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 RIN1Q13671 783 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CARTPTQ16568 116 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 HFEQ30201 348 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 TMPRSS11AQ6ZMR5 421 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 Q6ZSR3 168 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 COMMD2Q86X83 199 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 BPIFB6Q8NFQ5 453 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 YIPF5Q969M3 257 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 ERGIC1Q969X5 290 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 PELI1Q96FA3 418 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 REG4Q9BYZ8 158 aa11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
CKAP2-202ENST00000378034 CAB39Q9Y376 341 aaPredicted RBP11.23□□□□□ -0.61
CKAP2-202ENST00000378034 MAP1AP78559 2803 aaPredicted RBP11.23□□□□□ -0.61
CKAP2-202ENST00000378034 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 H0YL77 283 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 RP2O75695 350 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 DHRS3O75911 302 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 HTR1AP08908 422 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 UBCP0CG48 685 aaKnown RBP11.22□□□□□ -0.61
CKAP2-202ENST00000378034 CCL1P22362 96 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 GNALP38405 381 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 NR4A2P43354 598 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 GATA4P43694 442 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 RIPPLY1Q0D2K3 151 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 ST3GAL4Q11206 333 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 DOK3Q7L591 496 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 SEMA6DQ8NFY4 1073 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 OR10AD1Q8NGE0 317 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 OR2G2Q8NGZ5 317 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 ITLN1Q8WWA0 313 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 PPP1R14AQ96A00 147 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 RNF166Q96A37 237 aaPredicted RBP11.22□□□□□ -0.61
CKAP2-202ENST00000378034 MEGF10Q96KG7 1140 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 ZNF184Q99676 751 aaPredicted RBP11.22□□□□□ -0.61
CKAP2-202ENST00000378034 ADAT1Q9BUB4 502 aaKnown RBP11.22□□□□□ -0.61
CKAP2-202ENST00000378034 SCN3BQ9NY72 215 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 SLC22A13Q9Y226 551 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 MPC1Q9Y5U8 109 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 TANC2Q9HCD6 1990 aa11.22□□□□□ -0.61
CKAP2-202ENST00000378034 F5H5P2 479 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 LYNX1G3V0Z9 82 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 XPNPEP2O43895 674 aa11.21□□□□□ -0.61
CKAP2-202ENST00000378034 HLA-DPB1P04440 258 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms