RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CT45A5P0DMU8 189 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CT45A7P0DMV0 189 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CT45A8P0DMV1 189 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CT45A9P0DMV2 189 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 GNB3P16520 340 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 DUSP1P28562 367 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 NKX2-1P43699 371 aaPredicted RBP16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 SLC37A1P57057 533 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 STARD6P59095 220 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CT45A2Q5DJT8 189 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CT45A1Q5HYN5 189 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 SLC51BQ86UW2 128 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 OR10X1Q8NGY0 326 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CT45A3Q8NHU0 189 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 SLC23A1Q9UHI7 598 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 EPOPA6NHQ4 379 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 ICMTO60725 284 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 WDR1O75083 606 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CLINT1Q14677 625 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 CA5BP1Q8WTZ4 195 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 PCNPQ8WW12 178 aaKnown RBP16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 DAZAP1Q96EP5 407 aaKnown RBP16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 SLC39A9Q9NUM3 307 aa16.02■□□□□ 0.15
CLSTN1-202ENST00000377298 OR10K2Q6IF99 312 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 Q8IYB0 196 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 MED30Q96HR3 178 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 SERPINE3A8MV23 424 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 EPPINO95925 133 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 IGHA2P01877 340 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 OR8U8P0C7N1 319 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 GNG3P63215 75 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 CST9LP1Q5W188 147 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 ALKAL2Q6UX46 152 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 GCNT2Q8N0V5 402 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 S100A11P31949 105 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 ZNF85Q03923 595 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 PNLIPRP3Q17RR3 467 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 SPATA46Q5T0L3 261 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 B3GNTL1Q67FW5 361 aaPredicted RBP16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 SSX3Q99909 188 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 FN3KRPQ9HA64 309 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 GLRX2Q9NS18 164 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 TRAPPC4Q9Y296 219 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 B4E171 279 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 LGALS8O00214 317 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 WISP3O95389 354 aaPredicted RBP16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 OR5H8P0DN80 308 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 GABRA1P14867 456 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 GALP22466 123 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 PEBP1P30086 187 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 TSPAN7P41732 249 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 MRPS34P82930 218 aaKnown RBP16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 HTD2P86397 168 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 CTF1Q16619 201 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 COL13A1Q5TAT6 717 aaPredicted RBP16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 EDARADDQ8WWZ3 215 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 NEURL2Q9BR09 285 aa16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 ZNF71Q9NQZ8 489 aaPredicted RBP16.01■□□□□ 0.15
CLSTN1-202ENST00000377298 A0A0U1RQK1 487 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 AVPR2P30518 371 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 SPINK14Q6IE38 97 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 TMEM217Q8N7C4 229 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 FAM213BQ8TBF2 198 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 OR2M5A3KFT3 312 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 C1QBP02746 253 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 OR2AK2Q8NG84 335 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 RNF141Q8WVD5 230 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 EXOGQ9Y2C4 368 aaKnown RBP16■□□□□ 0.15
CLSTN1-202ENST00000377298 A0A0B4J203 849 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 RTL8BQ17RB0 113 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 OR6X1Q8NH79 312 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 PTPMT1Q8WUK0 201 aaPredicted RBP16■□□□□ 0.15
CLSTN1-202ENST00000377298 DOK1Q99704 481 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 KRBOX1C9JBD0 128 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 SDCBPO00560 298 aaPredicted RBP16■□□□□ 0.15
CLSTN1-202ENST00000377298 FABP1P07148 127 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 FGF9P31371 208 aaPredicted RBP16■□□□□ 0.15
CLSTN1-202ENST00000377298 WDR38Q5JTN6 314 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 LSMEM1Q8N8F7 131 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 C4orf45Q96LM5 186 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 DLL4Q9NR61 685 aa16■□□□□ 0.15
CLSTN1-202ENST00000377298 COL11A1P12107 1806 aaPredicted RBP15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 RER1O15258 196 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 XRCC3O43542 346 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 SNAPINO95295 136 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 ZNF32P17041 273 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 SERPINF1P36955 418 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 CDKN2AP42771 156 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 FBXO17Q96EF6 278 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 PFDN5Q99471 154 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 SF3B5Q9BWJ5 86 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 LIN7CQ9NUP9 197 aaKnown RBP15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 ARPC4-TTLL3A0A0A6YYG9 625 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 SPAARA0A1B0GVQ0 90 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 FAM221AA4D161 298 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 RAB13P51153 203 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 CD226Q15762 336 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 ZNF626Q68DY1 528 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 FBXL14Q8N1E6 418 aa15.99■□□□□ 0.15
CLSTN1-202ENST00000377298 OR13C8Q8NGS7 320 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms