RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TMEM108Q6UXF1 575 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 SLC36A1Q7Z2H8 476 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 OR10AD1Q8NGE0 317 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 TMEM230Q96A57 120 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 PARP12Q9H0J9 701 aaKnown RBP12.23□□□□□ -0.45
GPC6-201ENST00000377047 FAM60AQ9NP50 221 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 KCNE1BA0A087WTH5 132 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 PI3P19957 117 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ACKR3P25106 362 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 HRH1P35367 487 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 SNTB1Q13884 538 aaKnown RBP12.23□□□□□ -0.45
GPC6-201ENST00000377047 MICBQ29980 383 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 CCL17Q92583 94 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 TCFL5Q9UL49 500 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 A0A0B4J2E0 115 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 A0A1B0GX12 115 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 HLA-HP01893 362 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ADRA2CP18825 462 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 BAMBIQ13145 260 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 DRAXINQ8NBI3 349 aaPredicted RBP12.23□□□□□ -0.45
GPC6-201ENST00000377047 EDARADDQ8WWZ3 215 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ANGPTL7O43827 346 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ADGRG3Q86Y34 549 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ZNF547Q8IVP9 402 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 OR10V1Q8NGI7 309 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 PLPPR2Q96GM1 343 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 GPR87Q9BY21 358 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 SLC26A1Q9H2B4 701 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 MMP25Q9NPA2 562 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 CSAG2Q9Y5P2 127 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 IFITM5A6NNB3 132 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 TOX3O15405 576 aaPredicted RBP12.23□□□□□ -0.45
GPC6-201ENST00000377047 PTBP1P26599 531 aaKnown RBP eCLIP12.23□□□□□ -0.457e-7■■■■■ 34.6
GPC6-201ENST00000377047 GNG10P50151 68 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 MPPED2Q15777 294 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 RHBDD2Q6NTF9 364 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 FAAP20Q6NZ36 180 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ZNF251Q9BRH9 671 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 MN1Q10571 1320 aaPredicted RBP12.23□□□□□ -0.45
GPC6-201ENST00000377047 CA6P23280 308 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 DTYMKP23919 212 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 ABI3BPQ7Z7G0 1075 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 PELI1Q96FA3 418 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 A0A1B0GTQ1 180 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 GPANK1O95872 356 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 GP2P55259 537 aaKnown RBP12.22□□□□□ -0.45
GPC6-201ENST00000377047 LIMS2Q7Z4I7 341 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 GON7Q9BXV9 100 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 DNAJB12Q9NXW2 375 aaKnown RBP12.22□□□□□ -0.45
GPC6-201ENST00000377047 NUP205Q92621 2012 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 H0Y8G0 127 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 SEMG1P04279 462 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 OR5H8P0DN80 308 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 S100A11P31949 105 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 WDR74Q6RFH5 385 aaPredicted RBP12.22□□□□□ -0.45
GPC6-201ENST00000377047 CREB3L2Q70SY1 520 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 OTOSQ8NHW6 89 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 M1APQ8TC57 530 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 NPAP1Q9NZP6 1156 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 DBX2Q6ZNG2 339 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 ADPRHL1Q8NDY3 354 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 BPIFCQ8NFQ6 507 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 A0A1B0GVG6 124 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 TMEM30CPA0ZSE6 113 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 OR5H15A6NDH6 313 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 GALNSP34059 522 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 FAHD1Q6P587 224 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 LYSMD2Q8IV50 215 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 ZNF439Q8NDP4 499 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 PXT1Q8NFP0 134 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 OR10P1Q8NGE3 313 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
GPC6-201ENST00000377047 SRD5A2P31213 254 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 TPBGQ13641 420 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 SOHLH1Q5JUK2 328 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 ZNF774Q6NX45 483 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 GNG3P63215 75 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 PLA1AQ53H76 456 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 SIAEQ9HAT2 523 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 SH2D7A6NKC9 451 aaPredicted RBP12.21□□□□□ -0.45
GPC6-201ENST00000377047 CT45A10P0DMU9 189 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 CCL2P13500 99 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 FUT7Q11130 342 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 YIPF5Q969M3 257 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 MCHR2Q969V1 340 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 BARX1Q9HBU1 254 aaPredicted RBP12.21□□□□□ -0.45
GPC6-201ENST00000377047 STRCP1A6NGW2 1772 aa12.21□□□□□ -0.45
GPC6-201ENST00000377047 H3BMH7 237 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 ZXDAP98168 799 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 HMGN3Q15651 99 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 C3AR1Q16581 482 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 TMUB2Q71RG4 321 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 SLC7A6Q92536 515 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 SLC6A13Q9NSD5 602 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 PAX6P26367 422 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 TNFAIP6P98066 277 aaPredicted RBP12.21□□□□□ -0.46
GPC6-201ENST00000377047 PRDX4Q13162 271 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms