RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RPP14O95059 124 aaKnown RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 IL2RAP01589 272 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 PGCP20142 388 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 EIF1AXP47813 144 aaKnown RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 ZNF41P51814 821 aaPredicted RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 ROM1Q03395 351 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 CBFBQ13951 182 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 RBMS2Q15434 407 aaKnown RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 SGCBQ16585 318 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 MISPQ8IVT2 679 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 BEST4Q8NFU0 473 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 OR6N2Q8NGY6 317 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 OR6S1Q8NH40 331 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 WNT2BQ93097 391 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 OR10A4Q9H209 315 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 METTL17Q9H7H0 456 aaPredicted RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 KLK11Q9UBX7 282 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 IGHV3-15A0A0B4J1V0 119 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 OR6C65A6NJZ3 312 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 SLC22A20A6NK97 555 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 FAM171A2A8MVW0 826 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 I3L521 148 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 SULT1C2O00338 296 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 XKRYO14609 159 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 AKR7A3O95154 331 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 MPC2O95563 127 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 MELTFP08582 738 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 ZNF17P17021 662 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 CXCR1P25024 350 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 CTSSP25774 331 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 KIR2DL2P43627 348 aaPredicted RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 SELENOPP49908 381 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 TAGLNQ01995 201 aaKnown RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 AANATQ16613 207 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 TMEM255AQ5JRV8 349 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 TEX30Q5JUR7 227 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 Q6ZTK2 550 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 FTMTQ8N4E7 242 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 MEIOBQ8N635 442 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 ROBO4Q8WZ75 1007 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 TAAR8Q969N4 342 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 TMEM106AQ96A25 262 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 ZBTB8AQ96BR9 441 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 STARD4Q96DR4 205 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 TSSK2Q96PF2 358 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 RBP7Q96R05 134 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 NARFLQ9H6Q4 476 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 SRA1Q9HD15 236 aaKnown RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 CHST11Q9NPF2 352 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 NKIRAS2Q9NYR9 191 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 VSX1Q9NZR4 365 aaPredicted RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 JKAMPQ9P055 326 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
VRK3-202ENST00000377011 ZNF346Q9UL40 294 aaKnown RBP10.87□□□□□ -0.67
VRK3-202ENST00000377011 MYO9AB2RTY4 2548 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 CREBBPQ92793 2442 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 A0A087WZY1 265 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 A0A1W2PNV4 684 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 UBE2QL1A1L167 161 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 GGT3PA6NGU5 568 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 EEF1E1-BLOC1S5C9J1V9 151 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 PSMD9O00233 223 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 ETV2O00321 342 aaPredicted RBP10.86□□□□□ -0.67
VRK3-202ENST00000377011 DCTN6O00399 190 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 SLC17A2O00624 439 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 F13BP05160 661 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 CD37P11049 281 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 COX6B1P14854 86 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 FSTP19883 344 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 SOX2P48431 317 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 CAPZA1P52907 286 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 CLDN12P56749 244 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 RPL27P61353 136 aaKnown RBP10.86□□□□□ -0.67
VRK3-202ENST00000377011 RAC1P63000 192 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 SLC17A1Q14916 467 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 OPCMLQ14982 345 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 POU4F3Q15319 338 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 MPPED2Q15777 294 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 TMEM176BQ3YBM2 270 aaPredicted RBP10.86□□□□□ -0.67
VRK3-202ENST00000377011 SMUG1Q53HV7 270 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 SLC18B1Q6NT16 456 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 KCTD18Q6PI47 426 aaPredicted RBP10.86□□□□□ -0.67
VRK3-202ENST00000377011 C22orf34Q6ZV56 151 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 DPY19L4Q7Z388 723 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 CDH26Q8IXH8 852 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 ZNF679Q8IYX0 411 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 PRSS35Q8N3Z0 413 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 ZNF519Q8TB69 540 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 RNF128Q8TEB7 428 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 ORAI1Q96D31 301 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 OPN3Q9H1Y3 402 aaPredicted RBP10.86□□□□□ -0.67
VRK3-202ENST00000377011 RNF122Q9H9V4 155 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 PIPOXQ9P0Z9 390 aa10.86□□□□□ -0.67
VRK3-202ENST00000377011 ZNF107Q9UII5 783 aaPredicted RBP10.86□□□□□ -0.67
VRK3-202ENST00000377011 FLVCR2Q9UPI3 526 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms