RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 M6PRP20645 277 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 PEBP1P30086 187 aaKnown RBP12.21□□□□□ -0.45
C9orf47-203ENST00000375851 SNRPNP63162 240 aaKnown RBP12.21□□□□□ -0.45
C9orf47-203ENST00000375851 LINC00303Q3SY05 128 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 BRICD5Q6PL45 260 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 D2HGDHQ8N465 521 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 NUBPLQ8TB37 319 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 IER2Q9BTL4 223 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 C17orf112F2Z3M2 114 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 GLRA1P23415 457 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 THBS4P35443 961 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 GZMMP51124 257 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 RAB1AP62820 205 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 ZNF718Q3SXZ3 478 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 SOHLH1Q5JUK2 328 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 SPTBP11277 2137 aa12.21□□□□□ -0.45
C9orf47-203ENST00000375851 hCG_1809904A0A1W2PP81 198 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 A0A1W2PPE2 198 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 A0A1W2PR64 198 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 A0A1W2PRV1 198 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 IGHV4-34P06331 123 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 DUSP1P28562 367 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 WDFY2Q96P53 400 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 SPNP16150 400 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 UBE2KP61086 200 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 OSR2Q8N2R0 312 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 SCCPDHQ8NBX0 429 aa12.21□□□□□ -0.46
C9orf47-203ENST00000375851 TRAV17A0A0B4J275 112 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 PLPP3O14495 311 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 DFFBO76075 338 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 OR2F2O95006 317 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 LSM11P83369 360 aaKnown RBP eCLIP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 FUT7Q11130 342 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 OR2F1Q13607 317 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 SSPNQ14714 243 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 OR8G2PQ6IF36 304 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 WDR74Q6RFH5 385 aaPredicted RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 RBMS3Q6XE24 437 aaKnown RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 APOBEC3DQ96AK3 386 aaPredicted RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 FUT6P51993 359 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 RAB11AP62491 216 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 RAC1P63000 192 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 NKX6-1P78426 367 aaPredicted RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 SSBP1Q04837 148 aaKnown RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 LSMEM1Q8N8F7 131 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 RBPMSQ93062 196 aaKnown RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 PCYT1BQ9Y5K3 369 aaPredicted RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 A0A1B0GTQ1 180 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 SPRY1O43609 319 aaPredicted RBP12.2□□□□□ -0.46
C9orf47-203ENST00000375851 CCL4P13236 92 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 ZNF92Q03936 586 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 DRAM2Q6UX65 266 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 ACOT7LQ6ZUV0 252 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 OR1S2Q8NGQ3 325 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 OIT3Q8WWZ8 545 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 MCHR2Q969V1 340 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 OCIAD1Q9NX40 245 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 SLC37A1P57057 533 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 CDONQ4KMG0 1287 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 TMEM52Q8NDY8 209 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 OR4S1Q8NGB4 309 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 MARC2Q969Z3 335 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 RASL10BQ96S79 203 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 TAF9BQ9HBM6 251 aa12.2□□□□□ -0.46
C9orf47-203ENST00000375851 SBF2Q86WG5 1849 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 SERPINE3A8MV23 424 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 C1QCP02747 245 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 CHRNB4P30926 498 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 SPATA46Q5T0L3 261 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 H2BFWTQ7Z2G1 175 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 FBXL14Q8N1E6 418 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 DTWD2Q8NBA8 298 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 SLC30A7Q8NEW0 376 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 OR2Y1Q8NGV0 311 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 LHX9Q9NQ69 397 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 RPS10-NUDT3A0A1W2PQS6 291 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 RPS10P46783 165 aaKnown RBP12.19□□□□□ -0.46
C9orf47-203ENST00000375851 ATG4DQ86TL0 474 aaPredicted RBP12.19□□□□□ -0.46
C9orf47-203ENST00000375851 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 CMTM3Q96MX0 182 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 RGPD4Q7Z3J3 1758 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 RAB27BO00194 218 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 HPNP05981 417 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 HTD2P86397 168 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 RAB35Q15286 201 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 WFDC8Q8IUA0 241 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 ZNF808Q8N4W9 903 aaPredicted RBP12.19□□□□□ -0.46
C9orf47-203ENST00000375851 KCNRGQ8N5I3 272 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 OR5M9Q8NGP3 310 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 RTN4IP1Q8WWV3 396 aaPredicted RBP12.19□□□□□ -0.46
C9orf47-203ENST00000375851 PTP4A1Q93096 173 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 SPSB1Q96BD6 273 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 CES1P1Q9UKY3 287 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
C9orf47-203ENST00000375851 TDRD15B5MCY1 1934 aaKnown RBP12.19□□□□□ -0.46
C9orf47-203ENST00000375851 M0R1B8 84 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms