RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 GABRA4P48169 554 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 CLDN6P56747 220 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 SLC35A1P78382 337 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 GAB4Q2WGN9 574 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 FDX2Q6P4F2 183 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 C10orf53Q8N6V4 93 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 BSCL2Q96G97 398 aaPredicted RBP18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 CDCA3Q99618 268 aaPredicted RBP18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 PBDC1Q9BVG4 233 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 TWSG1Q9GZX9 223 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 SLC25A31Q9H0C2 315 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 SIRT7Q9NRC8 400 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 PPP1CCP36873 323 aaKnown RBP18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 TMEM184AQ6ZMB5 413 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 OR2L3Q8NG85 312 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 RTBDNQ9BSG5 229 aaPredicted RBP18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 B9D1Q9UPM9 204 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 MMACHCQ9Y4U1 282 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 OR1A2Q9Y585 309 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 TMEM14AQ9Y6G1 99 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 HEATR5AQ86XA9 2040 aa18.32■□□□□ 0.52
TMEFF1-201ENST00000374879 H3BQ15 152 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 SOX15O60248 233 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 PRH1P02810 166 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 APLNRP35414 380 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 RUNX2Q13950 521 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 C4orf17Q53FE4 359 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 SPRED2Q7Z698 418 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 KDM8Q8N371 416 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 BEND2Q8NDZ0 799 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 OTOSQ8NHW6 89 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 NOL4LQ96MY1 436 aaPredicted RBP18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 OR8B4Q96RC9 309 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 DDA1Q9BW61 102 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 RAB22AQ9UL26 194 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 SZT2Q5T011 3432 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 KIF26BQ2KJY2 2108 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 TRPM6Q9BX84 2022 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 SYT7O43581 403 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 CT62P0C5K7 136 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 GZMBP10144 247 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 UNC119Q13432 240 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 ALG10Q5BKT4 473 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 PTCRAQ6ISU1 281 aaPredicted RBP18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 MFSD9Q8NBP5 474 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 NAXEQ8NCW5 288 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 OR4N2Q8NGD1 307 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 ZCCHC10Q8TBK6 192 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 MOGAT1Q96PD6 335 aa18.31■□□□□ 0.52
TMEFF1-201ENST00000374879 LMX1BO60663 402 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 ZNF217O75362 1048 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 LRRC75AQ8NAA5 344 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 PTX4Q96A99 478 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 OR14J1Q9UGF5 321 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 A0A087WZY1 265 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 CCDC187A0A096LP49 1063 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 IGKV1D-16P01601 117 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 SERPINA2P20848 420 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 FGF7P21781 194 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 LMO1P25800 156 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 CD200P41217 278 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 GRK6P43250 576 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 DNASE1L1P49184 302 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 DEFB134Q4QY38 66 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 TMEFF1Q8IYR6 380 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 HDAC8Q9BY41 377 aa18.3■□□□□ 0.52
TMEFF1-201ENST00000374879 MUC22E2RYF6 1773 aaPredicted RBP18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 ZNF25P17030 456 aaPredicted RBP18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 CEBPGP53567 150 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 UBE2KP61086 200 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 JOSD1Q15040 202 aaPredicted RBP18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 C1orf100Q5SVJ3 147 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 NPSR1Q6W5P4 371 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 DTWD2Q8NBA8 298 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 SMARCD2Q92925 531 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 CYYR1Q96J86 154 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 OR11A1Q9GZK7 315 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 SH3BGRL3Q9H299 93 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 CNTD2Q9H8S5 307 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 IL23AQ9NPF7 189 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 MBNL1Q9NR56 388 aaKnown RBP18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 GRHPRQ9UBQ7 328 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 RHBDD3Q9Y3P4 386 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 VCANP13611 3396 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 IGKV1D-42A0A075B6H8 117 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 SOX1O00570 391 aaPredicted RBP18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 SEC11BP0C7V7 166 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 FSTP19883 344 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 KLK2P20151 261 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 GLRA1P23415 457 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 PEBP1P30086 187 aaKnown RBP18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 GJA4P35212 333 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 VN1R4Q7Z5H5 301 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 OR2L8Q8NGY9 312 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 HPSE2Q8WWQ2 592 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 ARV1Q9H2C2 271 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 MEMO1Q9Y316 297 aa18.29■□□□□ 0.52
TMEFF1-201ENST00000374879 ZNF860A6NHJ4 632 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 HSPB2A8KAH6 182 aa18.28■□□□□ 0.52
TMEFF1-201ENST00000374879 IL18BPO95998 194 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms