RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 OR4C16Q8NGL9 310 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 H1FXQ92522 213 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 FAM173AQ9BQD7 235 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 NEURL2Q9BR09 285 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 C12orf10Q9HB07 376 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 SH3BGRL2Q9UJC5 107 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 KCND3Q9UK17 655 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 VAMP5O95183 116 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 GUSBP08236 651 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 PRR35P0CG20 571 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 RAB5AP20339 215 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 EXT1Q16394 746 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 PTOV1Q86YD1 416 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 CA13Q8N1Q1 262 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 CISD2Q8N5K1 135 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 ASH2LQ9UBL3 628 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 TRAPPC4Q9Y296 219 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 PRUNE2Q8WUY3 3088 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 TRAV1-2A0A0B4J238 106 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 FGF17O60258 216 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 EPXP11678 715 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 PI3P19957 117 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 COX5AP20674 150 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 RBPJQ06330 500 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 RUNX2Q13950 521 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 PLAC9Q5JTB6 97 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF468Q5VIY5 522 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 LHFPL2Q6ZUX7 228 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 PRSS42Q7Z5A4 293 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 KLHDC1Q8N7A1 406 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 OR1J1Q8NGS3 322 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 COX14Q96I36 57 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 MYLKQ15746 1914 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 ADH4P08319 380 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 COL9A1P20849 921 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 CALCRP30988 508 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 RRADP55042 308 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 FABP9Q0Z7S8 132 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 KCNAB1Q14722 419 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 BCORP1Q8N888 145 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 RHOFQ9HBH0 211 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 CLCF1Q9UBD9 225 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 KCNG2Q9UJ96 466 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 FAM96BQ9Y3D0 163 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 AQP8O94778 261 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 GTF2H5Q6ZYL4 71 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 LIN7CQ9NUP9 197 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 R4GMQ9 66 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 CD22P20273 847 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 FCER1GP30273 86 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 CSN1S1P47710 185 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 RPL18Q07020 188 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 THEM4Q5T1C6 240 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM92Q6UXU6 159 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 APH1AQ96BI3 265 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 RHNO1Q9BSD3 238 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 SLC5A6Q9Y289 635 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A087WV62 115 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A1W2PPQ1 181 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 K7EQS6 105 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 WDR1O75083 606 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 WNT11O96014 354 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 IL5P05113 134 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 QDPRP09417 244 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 OR5H8P0DN80 308 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 FXNQ16595 210 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 ADGRG3Q86Y34 549 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 FER1L6-AS2Q96M78 137 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 ISG20L2Q9H9L3 353 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 GPR84Q9NQS5 396 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF230Q9UIE0 474 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 PPP1R3CQ9UQK1 317 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 POLDIP2Q9Y2S7 368 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 LRRC30A6NM36 301 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 PHOX2AO14813 284 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 HRO43593 1189 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 LINC00303Q3SY05 128 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 LRRTM1Q86UE6 522 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 ARHGDIGQ99819 225 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A1W2PPH5 198 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 DSCR3O14972 297 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 SLC31A2O15432 143 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 FCMRO60667 390 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 ACSM4P0C7M7 580 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 DHODHQ02127 395 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 CORO6Q6QEF8 472 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 BATF2Q8N1L9 274 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 GPR119Q8TDV5 335 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 DLL4Q9NR61 685 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 DECR2Q9NUI1 292 aa11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 GDF2Q9UK05 429 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-202ENST00000374747 SELEP16581 610 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 EPHA2P29317 976 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 OPRM1P35372 400 aa11.08□□□□□ -0.64
NPLOC4-202ENST00000374747 BAMBIQ13145 260 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms