RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 GIFP27352 417 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 CRABP1P29762 137 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 KIR3DL2P43630 455 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ARRB1P49407 418 aaPredicted RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 SRP9P49458 86 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 ART1P52961 327 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 TAS2R20P59543 309 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 RAP1BP61224 184 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 RAP1AP62834 184 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 RIPPLY1Q0D2K3 151 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 C17orf67Q0P5P2 114 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 SNTB2Q13425 540 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 SHBQ15464 509 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 FCN2Q15485 313 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ACKR1Q16570 336 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 PCK2Q16822 640 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 GSG1Q2KHT4 349 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 Q5BKY6 102 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 SLC25A53Q5H9E4 307 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 WDR38Q5JTN6 314 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 TEX30Q5JUR7 227 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 TMEM69Q5SWH9 247 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 C1orf189Q5VU69 101 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 KCTD18Q6PI47 426 aaPredicted RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 DNM1P34Q6PK57 102 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 LANCL3Q6ZV70 420 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 CREB3L2Q70SY1 520 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ZNF767PQ75MW2 155 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 FCRLAQ7L513 359 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 LINGO2Q7L985 606 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 DPY19L4Q7Z388 723 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ANKRD37Q7Z713 158 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 PM20D2Q8IYS1 436 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ZNF679Q8IYX0 411 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 DND1Q8IYX4 353 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 SLC7A5P1Q8MH63 180 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 FBXL14Q8N1E6 418 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 PRSS35Q8N3Z0 413 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ZNF433Q8N7K0 673 aaPredicted RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 ZNF676Q8N7Q3 588 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 APCDD1LQ8NCL9 501 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 OR8K3Q8NH51 312 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 MFSD8Q8NHS3 518 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 SYNPRQ8TBG9 265 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 RNF128Q8TEB7 428 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 C8orf44Q96CB5 159 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 S100A16Q96FQ6 103 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 ZFP3Q96NJ6 502 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 GFM1Q96RP9 751 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 AMELYQ99218 206 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 NPAS1Q99742 590 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 UTP23Q9BRU9 249 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 SF3B5Q9BWJ5 86 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 BEX2Q9BXY8 128 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 C20orf85Q9H1P6 137 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 OR51J1Q9H342 316 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 AUNIPQ9H7T9 357 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 TMEM165Q9HC07 324 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 SLC17A5Q9NRA2 495 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 PLSCR3Q9NRY6 295 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 MRPL22Q9NWU5 206 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 SLCO1C1Q9NYB5 712 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 STMN3Q9NZ72 180 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 CTSFQ9UBX1 484 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 KCNG2Q9UJ96 466 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 FBXL3Q9UKT7 428 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 CLEC4AQ9UMR7 237 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 FOXJ3Q9UPW0 622 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 NPTNQ9Y639 398 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 WDR87Q6ZQQ6 2873 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 TRAV8-7A0A075B6U6 113 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 A0A087WV48 116 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 MEIKINA0A087WXM9 373 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 A0A1B0GUH1 482 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 A0A1W2PNV4 684 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 ANXA2P2A6NMY6 339 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 C17orf51A8MQB3 221 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 C11orf98E9PRG8 122 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 SLC17A2O00624 439 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 TNFRSF13BO14836 293 aaPredicted RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 XRCC3O43542 346 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 ZNF780AO75290 641 aaPredicted RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 ALOX12BO75342 701 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 SRSF10O75494 262 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 AQP8O94778 261 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 GLSO94925 669 aaPredicted RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 CER1O95813 267 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 PLGP00747 810 aaPredicted RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 MT-ND4P03905 459 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 HEXBP07686 556 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 SPARCP09486 303 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 CTLA4P16410 223 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 PSMB1P20618 241 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 ACHEP22303 614 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 CDK2P24941 298 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 HOXA6P31267 233 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 APOBEC1P41238 236 aaKnown RBP4.2□□□□□ -1.74
USP48-202ENST00000374730 MAGEB1P43366 347 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 CXCL12P48061 93 aa4.2□□□□□ -1.74
USP48-202ENST00000374730 DAP3P51398 398 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms