RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 RAE1P78406 368 aaKnown RBP10.31□□□□□ -0.76
PTPRF-203ENST00000372407 PHYHD1Q5SRE7 291 aa10.31□□□□□ -0.76
PTPRF-203ENST00000372407 TEX261Q6UWH6 196 aa10.31□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF793Q6ZN11 406 aa10.31□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF705AQ6ZN79 300 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-203ENST00000372407 FN3KRPQ9HA64 309 aa10.31□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF331Q9NQX6 463 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-203ENST00000372407 ST3GAL6Q9Y274 331 aa10.31□□□□□ -0.76
PTPRF-203ENST00000372407 U3KQ87 197 aa10.31□□□□□ -0.76
PTPRF-203ENST00000372407 LTBP1Q14766 1721 aa10.31□□□□□ -0.76
PTPRF-203ENST00000372407 KCNE1BA0A087WTH5 132 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 TGOLN2O43493 480 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 SLC25A1P53007 311 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF121P58317 390 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-203ENST00000372407 RPS23P62266 143 aaKnown RBP10.3□□□□□ -0.76
PTPRF-203ENST00000372407 PNLIPRP3Q17RR3 467 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 FAM74A1Q5RGS3 127 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 MAMSTRQ6ZN01 415 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF687Q8N1G0 1237 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 MMP25Q9NPA2 562 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 DECR2Q9NUI1 292 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 FOXJ3Q9UPW0 622 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 ATAD5Q96QE3 1844 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 SERTM1A2A2V5 107 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 OR2W5A6NFC9 320 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 NDUFB7P17568 137 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 LGALS4P56470 323 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 PLA1AQ53H76 456 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 CORO2AQ92828 525 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF355PQ9NSJ1 428 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 DICER1Q9UPY3 1922 aaKnown RBP10.3□□□□□ -0.76
PTPRF-203ENST00000372407 C2CD4DB7Z1M9 353 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 GLULP15104 373 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 CLLU1Q5K131 121 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 GLDNQ6ZMI3 551 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-203ENST00000372407 HMGCLL1Q8TB92 370 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 C2CD4CQ8TF44 421 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 REEP6Q96HR9 211 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 C5orf49A4QMS7 147 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 K7EQM0 130 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 BCL2L11O43521 198 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 SSSCA1O60232 199 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 NDUFB6O95139 128 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 ZFPL1O95159 310 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 ZIC2O95409 532 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-203ENST00000372407 OR2B8PP59922 312 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 FOXF1Q12946 379 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 SSX1Q16384 188 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 FAM219BQ5XKK7 198 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 CD300LDQ6UXZ3 194 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 FAM185AQ8N0U4 392 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 ZADH2Q8N4Q0 377 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 WDR34Q96EX3 536 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 SLC35E1Q96K37 410 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 LIN7CQ9NUP9 197 aaKnown RBP10.3□□□□□ -0.76
PTPRF-203ENST00000372407 TRPM7Q96QT4 1865 aa10.3□□□□□ -0.76
PTPRF-203ENST00000372407 TXNDC12O95881 172 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 IGHA2P01877 340 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 S100A8P05109 93 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 OR10J4P0C629 311 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 SLC16A12Q6ZSM3 486 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF683Q8IZ20 524 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 ZBTB44Q8NCP5 570 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 KCNE4Q8WWG9 221 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 DHRS9Q9BPW9 319 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 PPP1R3CQ9UQK1 317 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 PCM1Q15154 2024 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 PLXNB2O15031 1838 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 RFPL4AA6NLU0 287 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 RFPL4AL1F8VTS6 287 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 RAB27BO00194 218 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 TRAF3IP2O43734 574 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-203ENST00000372407 CBR3O75828 277 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 METAP1P53582 386 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 YBX1P67809 324 aaKnown RBP10.29□□□□□ -0.76
PTPRF-203ENST00000372407 DUSP2Q05923 314 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 DMWDQ09019 674 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 TIGITQ495A1 244 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 ELFN2Q5R3F8 820 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 FAM58AQ8N1B3 248 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 SCCPDHQ8NBX0 429 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 ZG16BQ96DA0 208 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 ALG14Q96F25 216 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 CIB3Q96Q77 187 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-203ENST00000372407 CABLES2Q9BTV7 478 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 ACTR3CQ9C0K3 210 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-203ENST00000372407 SLC17A5Q9NRA2 495 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 A0A096LPE4 126 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 A0A1W2PPH5 198 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 A0A1W2PPZ6 126 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 PRSS23O95084 383 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 MBP02144 154 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 CRYAAP02489 173 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 FABP1P07148 127 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 AVPR2P30518 371 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 OR1J1Q8NGS3 322 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 IFI44Q8TCB0 444 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms