RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 APCDD1Q8J025 514 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 POLEQ07864 2286 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 CRXO43186 299 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-201ENST00000371817 LIPIQ6XZB0 460 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 OPALINQ96PE5 141 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 PECRQ9BY49 303 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 FZD9O00144 591 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 TIAL1Q01085 375 aaKnown RBP eCLIP13.89□□□□□ -0.19
COL5A1-201ENST00000371817 C17orf67Q0P5P2 114 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 TRMT12Q53H54 448 aaKnown RBP13.89□□□□□ -0.19
COL5A1-201ENST00000371817 NSUN5P2Q63ZY6 315 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 ZNF595Q8IYB9 648 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 ARHGEF39Q8N4T4 335 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 TCRBV21S2A2A0A5A6 115 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 CTNSO60931 367 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 CST6Q15828 149 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 COX19Q49B96 90 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 A0A1B0GWA3 101 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 TCRBV16S1A1N1A0A5B0 115 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 ZFAND5O76080 213 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 OPRM1P35372 400 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 JAG1P78504 1218 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 OR2J1Q9GZK6 312 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 CYSLTR2Q9NS75 346 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 HLA-DRB3P79483 266 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 DEFB115Q30KQ5 88 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 PELI3Q8N2H9 469 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 DUSP18Q8NEJ0 188 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 UBALD1Q8TB05 177 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 OR51M1Q9H341 326 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 STARD5Q9NSY2 213 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 SLC17A4Q9Y2C5 497 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 DIRC3C9JPN6 131 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 HLA-DRB5Q30154 266 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 USP53Q70EK8 1073 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 TAAR6Q96RI8 345 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 BOKQ9UMX3 212 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-201ENST00000371817 BCL3P20749 454 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 SLC6A1P30531 599 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 MRM1Q6IN84 353 aaKnown RBP13.89□□□□□ -0.19
COL5A1-201ENST00000371817 ADAT1Q9BUB4 502 aaKnown RBP13.89□□□□□ -0.19
COL5A1-201ENST00000371817 COMMD5Q9GZQ3 224 aa13.89□□□□□ -0.19
COL5A1-201ENST00000371817 F5P12259 2224 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 A0A1B0GTW7 788 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 ISLRO14498 428 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 SH2D1BO14796 132 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 GDF1P27539 372 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 INSL6Q9Y581 213 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.88□□□□□ -0.19
COL5A1-201ENST00000371817 ACSM6Q6P461 480 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 GPR37O15354 613 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 CA2P00918 260 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 PGA3P0DJD8 388 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 FOLR3P41439 243 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 CAMPP49913 170 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 EMP1P54849 157 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 PNLIPRP3Q17RR3 467 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 FAM74A3Q4VXF1 159 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 GPRIN1Q7Z2K8 1008 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 TTC9Q92623 222 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
COL5A1-201ENST00000371817 ACER3Q9NUN7 267 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 GEMIN2O14893 280 aaKnown RBP13.88□□□□□ -0.19
COL5A1-201ENST00000371817 ZNF253O75346 499 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 DDTP30046 118 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 FCRL6Q6DN72 434 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 STAC2Q6ZMT1 411 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 ARFGAP1Q8N6T3 406 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 H3BP45 60 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 CRYABP02511 175 aaKnown RBP13.88□□□□□ -0.19
COL5A1-201ENST00000371817 CD82P27701 267 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 BSGP35613 385 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 CEBPDP49716 269 aaPredicted RBP13.88□□□□□ -0.19
COL5A1-201ENST00000371817 LYSMD4Q5XG99 296 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 BTLAQ7Z6A9 289 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 H1FXQ92522 213 aaKnown RBP13.88□□□□□ -0.19
COL5A1-201ENST00000371817 IL17CQ9P0M4 197 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 NID1P14543 1247 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 GSG1Q2KHT4 349 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 EIF1BO60739 113 aaKnown RBP13.88□□□□□ -0.19
COL5A1-201ENST00000371817 GPX2P18283 190 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 BMP5P22003 454 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 C9orf135Q5VTT2 229 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 OR52N4Q8NGI2 321 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 OR5C1Q8NGR4 320 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 OR4C12Q96R67 309 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 TBX15Q96SF7 602 aa13.88□□□□□ -0.19
COL5A1-201ENST00000371817 C3P01024 1663 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 KMT2EQ8IZD2 1858 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 LGALS4P56470 323 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 SRD5A3Q9H8P0 318 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 A0A1B0GV90 55 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 NDUFB6O95139 128 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 ARRDC1Q8N5I2 433 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 NGBQ9NPG2 151 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 SMCHD1A6NHR9 2005 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 FAM74A7A6NL05 159 aa13.87□□□□□ -0.19
COL5A1-201ENST00000371817 PPM1DO15297 605 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms