RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 FLVCR1Q9Y5Y0 555 aa13.2□□□□□ -0.3
NDC1-201ENST00000371429 NUP214P35658 2090 aaPredicted RBP13.19□□□□□ -0.3
NDC1-201ENST00000371429 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 CDC14BO60729 498 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 CLEC3BP05452 202 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 ATF1P18846 271 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 HNRNPFP52597 415 aaKnown RBP13.19□□□□□ -0.3
NDC1-201ENST00000371429 FABP5Q01469 135 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 MC2RQ01718 297 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 VSTM2LQ96N03 204 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 SPRY1O43609 319 aaPredicted RBP13.19□□□□□ -0.3
NDC1-201ENST00000371429 ANGPTL7O43827 346 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 ADH4P08319 380 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 HFEQ30201 348 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 CDC20BQ86Y33 519 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 C20orf85Q9H1P6 137 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 C12orf10Q9HB07 376 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 GLRX2Q9NS18 164 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
NDC1-201ENST00000371429 ACTL6AO96019 429 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 PTBP1P26599 531 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■□□ 16.7
NDC1-201ENST00000371429 CASP3P42574 277 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 THBS3P49746 956 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 TPBGQ13641 420 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 OIT3Q8WWZ8 545 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 ORAI1Q96D31 301 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 CYR61O00622 381 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 PPIHO43447 177 aaKnown RBP13.19□□□□□ -0.3
NDC1-201ENST00000371429 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
NDC1-201ENST00000371429 PSG6Q00889 435 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 NANPQ8TBE9 248 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 COMMD5Q9GZQ3 224 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 FBXO8Q9NRD0 319 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 FZR1Q9UM11 496 aa13.19□□□□□ -0.3
NDC1-201ENST00000371429 TCRBV16S1A1N1A0A5B0 115 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 GNB3P16520 340 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 GABRA4P48169 554 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 GP2P55259 537 aaKnown RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 RPS27AP62979 156 aaKnown RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 UBA52P62987 128 aaKnown RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 CCDC71Q8IV32 467 aaPredicted RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 SLA2Q9H6Q3 261 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 ZNF391Q9UJN7 358 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 CD3EP07766 207 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 EIF4EBP2Q13542 120 aaPredicted RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 ZNF266Q14584 549 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 SLC22A18ASQ8N1D0 253 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 SPSB1Q96BD6 273 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 ZNF486Q96H40 463 aaPredicted RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 ZNF385DQ9H6B1 395 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 OR5H8P0DN80 308 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 NKX2-1P43699 371 aaPredicted RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 SLC37A1P57057 533 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 UBE3DQ7Z6J8 389 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 HSD17B11Q8NBQ5 300 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 CCL17Q92583 94 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 ZNF764Q96H86 408 aaPredicted RBP13.18□□□□□ -0.3
NDC1-201ENST00000371429 SLC35E1Q96K37 410 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 SEC22CQ9BRL7 303 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 CNTNAP3Q9BZ76 1288 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 DLL4Q9NR61 685 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 CCL3P10147 92 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 TMEM11P17152 192 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 OR10A3P58181 314 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 S100A12P80511 92 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 C3AR1Q16581 482 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 FAM213BQ8TBF2 198 aa13.18□□□□□ -0.3
NDC1-201ENST00000371429 PLPP3O14495 311 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 FADS1O60427 444 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 EPPINO95925 133 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 CHATP28329 748 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 FCGR2CP31995 323 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 RANGRFQ9HD47 186 aaPredicted RBP13.17□□□□□ -0.3
NDC1-201ENST00000371429 XIRP1Q702N8 1843 aaKnown RBP13.17□□□□□ -0.3
NDC1-201ENST00000371429 A0A1W2PQD3 144 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 ST8SIA3O43173 380 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 CA6P23280 308 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 KLF3P57682 345 aaPredicted RBP13.17□□□□□ -0.3
NDC1-201ENST00000371429 RAB5BP61020 215 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 CD226Q15762 336 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 Q8IYB0 196 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
NDC1-201ENST00000371429 TMEM200CA6NKL6 621 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 RHOUQ7L0Q8 258 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 OR1S2Q8NGQ3 325 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 ZNF501Q96CX3 271 aaPredicted RBP13.17□□□□□ -0.3
NDC1-201ENST00000371429 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
NDC1-201ENST00000371429 AGFG2O95081 481 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 DUSP1P28562 367 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 DGCR2P98153 550 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 TLE4Q04727 773 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 MOGAT1Q96PD6 335 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 TSPAN32Q96QS1 320 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 ZNF436Q9C0F3 470 aaPredicted RBP13.17□□□□□ -0.3
NDC1-201ENST00000371429 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 NTN4Q9HB63 628 aa13.17□□□□□ -0.3
NDC1-201ENST00000371429 PILRBQ9UKJ0 227 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms