RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 LAP3P28838 519 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 AGTR1P30556 359 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 HSF2Q03933 536 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 ZNF273Q14593 569 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 PCK2Q16822 640 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 ZNF684Q5T5D7 378 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 LCN1P1Q5VSP4 162 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 GFRALQ6UXV0 394 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 DPY19L4Q7Z388 723 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 HDDC2Q7Z4H3 204 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 P4HA3Q7Z4N8 544 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 SATL1Q86VE3 508 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 CDC20BQ86Y33 519 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 MCEMP1Q8IX19 187 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 GCNT2Q8N0V5 402 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 ACBD7Q8N6N7 88 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 DNAAF1Q8NEP3 725 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 OR10H4Q8NGA5 316 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 SETD6Q8TBK2 473 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 NABP1Q96AH0 204 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 GMPPAQ96IJ6 420 aaPredicted RBP3.09□□□□□ -1.91
MCF2-202ENST00000370573 RBM24Q9BX46 236 aaKnown RBP3.09□□□□□ -1.91
MCF2-202ENST00000370573 C1QTNF5Q9BXJ0 243 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 TTTY10Q9BZA0 68 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 LINC00470Q9BZP3 86 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 POLE4Q9NR33 117 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 EMC3Q9P0I2 261 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 RABL2BQ9UNT1 228 aa3.09□□□□□ -1.91
MCF2-202ENST00000370573 EXOSC1Q9Y3B2 195 aaKnown RBP3.09□□□□□ -1.91
MCF2-202ENST00000370573 SIRT4Q9Y6E7 314 aaPredicted RBP3.09□□□□□ -1.91
MCF2-202ENST00000370573 COL6A6A6NMZ7 2263 aa3.09□□□□□ -1.92
MCF2-202ENST00000370573 POLEQ07864 2286 aa3.09□□□□□ -1.92
MCF2-202ENST00000370573 A0A1W2PRV1 198 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TMEM129A0AVI4 362 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 DAPL1A0PJW8 107 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 IRGMA1A4Y4 181 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CBY3A6NI87 242 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZNF99A8MXY4 864 aaPredicted RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 E9PI62 339 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 H3BSA7 217 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 PSMD9O00233 223 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 LRRTM2O43300 516 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CGAP01215 116 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 HLA-DQA2P01906 255 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR2T7P0C7T2 308 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SFTPCP11686 197 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 FCGR2AP12318 317 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ABOP16442 354 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CEACAM8P31997 349 aaPredicted RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 S100A5P33763 92 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR3A2P47893 321 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ENTPD1P49961 510 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR12D2P58182 307 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SIRPAP78324 504 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ADORA2A-AS1P86434 159 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 GLO1Q04760 184 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ENDOGQ14249 297 aaKnown RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 SGCAQ16586 387 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CEACAM16Q2WEN9 425 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TP53I3Q53FA7 332 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TEX30Q5JUR7 227 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SYT6Q5T7P8 510 aaPredicted RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 C1orf185Q5T7R7 199 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 DNM1P34Q6PK57 102 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CORO6Q6QEF8 472 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZNF322Q6U7Q0 402 aaPredicted RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 PRSS45Q7RTY3 260 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZNF100Q8IYN0 542 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 GPR137CQ8N3F9 429 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR6N2Q8NGY6 317 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OR2T27Q8NH04 317 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 FGFBP3Q8TAT2 258 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 FNDC8Q8TC99 324 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SPRYD4Q8WW59 207 aaPredicted RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 RORBQ92753 470 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 OPALINQ96PE5 141 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ALG8Q9BVK2 526 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ULBP2Q9BZM5 246 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SLCO5A1Q9H2Y9 848 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TMEM165Q9HC07 324 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 CRLF2Q9HC73 371 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SLCO1C1Q9NYB5 712 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZMAT5Q9UDW3 170 aaKnown RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 MRM2Q9UI43 246 aaKnown RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 KCNG2Q9UJ96 466 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 LHFPL6Q9Y693 200 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ARHGAP21Q5T5U3 1957 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 INTS1Q8N201 2190 aaKnown RBP3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZNF670-ZNF695F2Z2N8 137 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 RPL36A-HNRNPH2H7BZ11 118 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 J3QLW9 94 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 SLC19A2O60779 497 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 WDR1O75083 606 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TNFSF13O75888 250 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 GABRA1P14867 456 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 ZNF19P17023 458 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 MYL12AP19105 171 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 PSMB9P28065 219 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 TGFBR2P37173 567 aa3.08□□□□□ -1.92
MCF2-202ENST00000370573 BLVRAP53004 296 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms