RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TUSC5Q8IXB3 177 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 LNX2Q8N448 690 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 STEAP2Q8NFT2 490 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 OR5D16Q8NGK9 328 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 ZNF671Q8TAW3 534 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 SLC41A3Q96GZ6 507 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 USB1Q9BQ65 265 aaKnown RBP13.06□□□□□ -0.32
LMO4-201ENST00000370542 ZNF350Q9GZX5 532 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 LAT2Q9GZY6 243 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 NOX3Q9HBY0 568 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 NRIP3Q9NQ35 241 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 PIPOXQ9P0Z9 390 aa13.06□□□□□ -0.32
LMO4-201ENST00000370542 HIVEP2P31629 2446 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 ANKRD20A5PA0PJZ0 165 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 SERINC4A6NH21 518 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 ZNF814B7Z6K7 855 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 HS3ST1O14792 307 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 FCMRO60667 390 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 NDUFB6O95139 128 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 PLAUP00749 431 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 IFNGP01579 166 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 HPXP02790 462 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 CHRM4P08173 479 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 H2AFB1P0C5Y9 115 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 PRG2P13727 222 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 PTH2RP49190 550 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 RGS8P57771 180 aaPredicted RBP13.05□□□□□ -0.32
LMO4-201ENST00000370542 SSBP1Q04837 148 aaKnown RBP13.05□□□□□ -0.32
LMO4-201ENST00000370542 CBFBQ13951 182 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 P2RY6Q15077 328 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 NDUFAF6Q330K2 333 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 RPL22L1Q6P5R6 122 aaKnown RBP13.05□□□□□ -0.32
LMO4-201ENST00000370542 UNQ9370/PRO34162Q6UXP9 181 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 RANBP3LQ86VV4 465 aaPredicted RBP13.05□□□□□ -0.32
LMO4-201ENST00000370542 OR10H4Q8NGA5 316 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 ST8SIA1Q92185 356 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 CNOT9Q92600 299 aaKnown RBP13.05□□□□□ -0.32
LMO4-201ENST00000370542 PMM1Q92871 262 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 S100A16Q96FQ6 103 aaKnown RBP13.05□□□□□ -0.32
LMO4-201ENST00000370542 PLPPR2Q96GM1 343 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 Q96MF0 132 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 HS6ST2Q96MM7 605 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 MCHR1Q99705 422 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 CMC2Q9NRP2 79 aa13.05□□□□□ -0.32
LMO4-201ENST00000370542 A0A0D9SG52 128 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 PQLC2LA1A4F0 135 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 PRAMEF27A3QJZ7 478 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 RIIAD1A6NNX1 92 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 H7C2Y5 167 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 OVOL3O00110 214 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 CYTIPO60759 359 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 FMO6PO60774 539 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 NUDT14O95848 222 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 THBS1P07996 1170 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 SBK2P0C263 348 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 FGL1Q08830 312 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 PABPC1L2AQ5JQF8 200 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 CLEC12AQ5QGZ9 265 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 LIN54Q6MZP7 749 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 LINGO2Q7L985 606 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 KRT77Q7Z794 578 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 ZNF454Q8N9F8 522 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 POMGNT2Q8NAT1 580 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 DNAAF1Q8NEP3 725 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 THEM6Q8WUY1 208 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 S100PBPQ96BU1 408 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 PHYHIPLQ96FC7 376 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
LMO4-201ENST00000370542 C12orf49Q9H741 205 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 ISG20L2Q9H9L3 353 aaKnown RBP13.04□□□□□ -0.32
LMO4-201ENST00000370542 MBD2Q9UBB5 411 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 PURGQ9UJV8 347 aaKnown RBP13.04□□□□□ -0.32
LMO4-201ENST00000370542 SLC35A3Q9Y2D2 325 aa13.04□□□□□ -0.32
LMO4-201ENST00000370542 MRPS7Q9Y2R9 242 aaKnown RBP13.04□□□□□ -0.32
LMO4-201ENST00000370542 CENPVL1A0A0U1RR11 272 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 RNF212BA8MTL3 300 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 ZNF724A8MTY0 619 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 F5H5P2 479 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 H7C1Q1 480 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 ARPC1BO15143 372 aaKnown RBP13.03□□□□□ -0.32
LMO4-201ENST00000370542 SELENOFO60613 162 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 PTP4A3O75365 173 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 CNOT4O95628 575 aaKnown RBP13.03□□□□□ -0.32
LMO4-201ENST00000370542 LPLP06858 475 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 DANCRP0C864 163 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 MGMTP16455 207 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 ZNF3P17036 446 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 OR3A2P47893 321 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 SLC3A1Q07837 685 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 LGALS3BPQ08380 585 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 NCMAPQ5T1S8 102 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 C3orf33Q6P1S2 294 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 PLBD1Q6P4A8 553 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 Q6ZT83 130 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 TMEM99Q8N816 258 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 PXT1Q8NFP0 134 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 FANK1Q8TC84 345 aa13.03□□□□□ -0.32
LMO4-201ENST00000370542 THRSPQ92748 146 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms