RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 DBTP11182 482 aaKnown RBP12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 ALDH3B2P48448 385 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 RIDAP52758 137 aaKnown RBP12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF85Q03923 595 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 EMX1Q04741 257 aaPredicted RBP12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 TIGD6Q17RP2 521 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 XAF1Q6GPH4 301 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 GPR141Q7Z602 305 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR56B2PQ8NGI1 322 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR2T27Q8NH04 317 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 RDH5Q92781 318 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 MYDGFQ969H8 173 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 PIMREGQ9BSJ6 248 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 SOX7Q9BT81 388 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 GGT3PA6NGU5 568 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 NDUFS8O00217 210 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF254O75437 659 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 INMTO95050 263 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 PNPP00491 289 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 HLA-DPB1P04440 258 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 CDK1P06493 297 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 SLC25A16P16260 332 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 SELEP16581 610 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 NR4A2P43354 598 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 FAM3AP98173 230 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 RIN1Q13671 783 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF684Q5T5D7 378 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR52H1Q8NGJ2 320 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 ITLN1Q8WWA0 313 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 LGALS12Q96DT0 336 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 LYZL4Q96KX0 146 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 DIRC2Q96SL1 478 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR10A2Q9H208 303 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 GSX1Q9H4S2 264 aaPredicted RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 SP140LQ9H930 580 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF275Q9NSD4 429 aaPredicted RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 IGHV1-69-2A0A0G2JMI3 117 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 hCG_38984A0A1B0GV85 526 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 TMEM269A0A1B0GVZ9 245 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 EFCAB10A6NFE3 127 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 ACHEP22303 614 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 GIFP27352 417 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 DCTDP32321 178 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 CRYBB2P43320 205 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 EGR3Q06889 387 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 PRSS48Q7RTY5 328 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR13G1Q8NGZ3 307 aa12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 SPRYD4Q8WW59 207 aaPredicted RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 DVL3Q92997 716 aaPredicted RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 EXOGQ9Y2C4 368 aaKnown RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 TEP1Q99973 2627 aaKnown RBP12.78□□□□□ -0.36
SMPDL3A-201ENST00000368440 YLPM1P49750 1951 aaKnown RBP12.77□□□□□ -0.36
SMPDL3A-201ENST00000368440 IGHV3-64DA0A0J9YX35 117 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 A0A1B0GWJ7 208 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 F5H5P2 479 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 FOSL1P15407 271 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 PCMT1P22061 227 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR2V2Q96R30 315 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 PBOV1Q9GZY1 135 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 OPA3Q9H6K4 179 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 TMEM100Q9NV29 134 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 FKBP14Q9NWM8 211 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 DCAF16Q9NXF7 216 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 DYSFO75923 2080 aa12.77□□□□□ -0.37
SMPDL3A-201ENST00000368440 IGHV4-61A0A0C4DH41 118 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 RPP14O95059 124 aaKnown RBP12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 CA6P23280 308 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 PSMB9P28065 219 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 GSK3AP49840 483 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 MRPS11P82912 194 aaKnown RBP12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 ZNF829Q3KNS6 432 aaPredicted RBP12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 TP53I3Q53FA7 332 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 SVOPQ8N4V2 548 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 YIPF7Q8N8F6 280 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 SIGLEC11Q96RL6 698 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 EGLN1Q9GZT9 426 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 G6PC2Q9NQR9 355 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 GTF2A1LQ9UNN4 478 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 R4GMQ9 66 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 SNTNA6NMZ2 147 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 LOC110117498-PIK3R3F6TDL0 507 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 KRT8P05787 483 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 TNFSF4P23510 183 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 ACKR3P25106 362 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 MMP16P51512 607 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 KRTAP1-1Q07627 177 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 GPR107Q5VW38 600 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 LIPNQ5VXI9 398 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 CLVS1Q8IUQ0 354 aaPredicted RBP12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 RORBQ92753 470 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 MEGF10Q96KG7 1140 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 ACOT13Q9NPJ3 140 aa12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 CNOT2Q9NZN8 540 aaKnown RBP12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 IL19Q9UHD0 177 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms