RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CCDC121Q6ZUS5 278 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 MEPCEQ7L2J0 689 aaKnown RBP15.86■□□□□ 0.13
CKS1B-203ENST00000368439 KLBQ86Z14 1044 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.86■□□□□ 0.13
CKS1B-203ENST00000368439 PHC2Q8IXK0 858 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 C1orf87Q8N0U7 546 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 SPERTQ8NA61 448 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 SPATA3Q8NHX4 192 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 PGAM5Q96HS1 289 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 LYZL4Q96KX0 146 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 OSBPL10Q9BXB5 764 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 OR10A2Q9H208 303 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 RGCCQ9H4X1 137 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 METTL17Q9H7H0 456 aaPredicted RBP15.86■□□□□ 0.13
CKS1B-203ENST00000368439 PPP1R3EQ9H7J1 279 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 LAMP5Q9UJQ1 280 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 PPIAL4AQ9Y536 164 aa15.86■□□□□ 0.13
CKS1B-203ENST00000368439 FSHBP01225 129 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 CPT2P23786 658 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 ROM1Q03395 351 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 KPNB1Q14974 876 aaKnown RBP15.85■□□□□ 0.13
CKS1B-203ENST00000368439 DEGS2Q6QHC5 323 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 C1QL2Q7Z5L3 287 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 WDR86Q86TI4 376 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 RFLNBQ8N5W9 214 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 OR8B12Q8NGG6 310 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 TMEM158Q8WZ71 300 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 PKP2Q99959 881 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 GABARAPL3Q9BY60 117 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 PRRG3Q9BZD7 231 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 NIPAL2Q9H841 368 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 METRNQ9UJH8 293 aa15.85■□□□□ 0.13
CKS1B-203ENST00000368439 ANKRD30BLA7E2S9 258 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 CFL1P23528 166 aaKnown RBP15.84■□□□□ 0.13
CKS1B-203ENST00000368439 ACKR3P25106 362 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 PAX2Q02962 417 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 GFOD2Q3B7J2 385 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 KRT77Q7Z794 578 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 C11orf53Q8IXP5 236 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 C19orf18Q8NEA5 215 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 DEFB108BQ8NET1 73 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 OR11L1Q8NGX0 322 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 DACT3Q96B18 629 aaPredicted RBP15.84■□□□□ 0.13
CKS1B-203ENST00000368439 OR8B4Q96RC9 309 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 C7orf69Q9H7B7 122 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 FN3KRPQ9HA64 309 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 ADGRL4Q9HBW9 690 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 FAM206AQ9NX38 181 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 HAO2Q9NYQ3 351 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 RNF7Q9UBF6 113 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 ENOPH1Q9UHY7 261 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 LRCH1Q9Y2L9 728 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 RHBDD3Q9Y3P4 386 aa15.84■□□□□ 0.13
CKS1B-203ENST00000368439 SAC3D1A6NKF1 404 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 PSMD9O00233 223 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 TNFRSF13BO14836 293 aaPredicted RBP15.83■□□□□ 0.12
CKS1B-203ENST00000368439 IRF2P14316 349 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 RPS2P15880 293 aaKnown RBP15.83■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF12P17014 697 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 ADRA2CP18825 462 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 ESCO2Q56NI9 601 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 KCTD18Q6PI47 426 aaPredicted RBP15.83■□□□□ 0.12
CKS1B-203ENST00000368439 LYPD2Q6UXB3 125 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF826PQ6ZT77 177 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 IL4I1Q96RQ9 567 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 CNN2Q99439 309 aaKnown RBP15.83■□□□□ 0.12
CKS1B-203ENST00000368439 C1orf123Q9NWV4 160 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 MIOXQ9UGB7 285 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 INSIG2Q9Y5U4 225 aa15.83■□□□□ 0.12
CKS1B-203ENST00000368439 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.82■□□□□ 0.12
CKS1B-203ENST00000368439 SLC22A31A6NKX4 558 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 LHBP01229 141 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 GRPP07492 148 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 DCTDP32321 178 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 PSMB10P40306 273 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF841Q6ZN19 808 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 DCDC5Q6ZRR9 648 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 KRT74Q7RTS7 529 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF679Q8IYX0 411 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 GCSAMQ8N6F7 178 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 CSNK2A3Q8NEV1 391 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 ASB17Q8WXJ9 295 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 ITPKCQ96DU7 683 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 NEIL1Q96FI4 390 aaPredicted RBP15.82■□□□□ 0.12
CKS1B-203ENST00000368439 RBM4BQ9BQ04 359 aaKnown RBP15.82■□□□□ 0.12
CKS1B-203ENST00000368439 SSBP3Q9BWW4 388 aaPredicted RBP15.82■□□□□ 0.12
CKS1B-203ENST00000368439 MROQ9BYG7 248 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 C14orf119Q9NWQ9 140 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 TMEM14AQ9Y6G1 99 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 STAB1Q9NY15 2570 aa15.82■□□□□ 0.12
CKS1B-203ENST00000368439 ACOD1A6NK06 481 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 E9PQ18 207 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 LGALS8O00214 317 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 TCF21O43680 179 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 ZNF254O75437 659 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 SRSF10O75494 262 aaKnown RBP15.81■□□□□ 0.12
CKS1B-203ENST00000368439 CST4P01036 141 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 IGLV3-1P01715 115 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 ALPLP05186 524 aa15.81■□□□□ 0.12
CKS1B-203ENST00000368439 MZT1Q08AG7 82 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms