RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DVL1O14640 695 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 SPI1P17947 270 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 MAGEA2P43356 314 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 FAM3AP98173 230 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 DEFA6Q01524 100 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 C17orf107Q6ZR85 190 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 WDR86Q86TI4 376 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 TBC1D15Q8TC07 691 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 SSMEM1Q8WWF3 244 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 DYRK2Q92630 601 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 LHX4Q969G2 390 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 SGK3Q96BR1 496 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 CITED1Q99966 193 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 TSSK6Q9BXA6 273 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 FAM107BQ9H098 131 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 TBC1D23Q9NUY8 699 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 ARL8BQ9NVJ2 186 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 PDP1Q9P0J1 537 aaPredicted RBP13.23□□□□□ -0.29
CKS1B-202ENST00000368436 TAGLN3Q9UI15 199 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 BAIAP2Q9UQB8 552 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 CMYA5Q8N3K9 4069 aa13.23□□□□□ -0.29
CKS1B-202ENST00000368436 hCG_1807616A0A1W2PRN6 198 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 DHRS12A0PJE2 317 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 ANKRD30BLA7E2S9 258 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 CCNB2O95067 398 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 GYPBP06028 91 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 CLUP10909 449 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 GRK5P34947 590 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 BLVRAP53004 296 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 ARF6P62330 175 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 GRB2P62993 217 aaKnown RBP13.22□□□□□ -0.29
CKS1B-202ENST00000368436 POU4F2Q12837 409 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 LINC01590Q5TEZ4 76 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 C16orf89Q6UX73 402 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 SLC16A9Q7RTY1 509 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 PRSS45Q7RTY3 260 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 DEFB107AQ8IZN7 70 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 AQP11Q8NBQ7 271 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 LY6G5BQ8NDX9 201 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 OR8S1Q8NH09 359 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 TOR3AQ9H497 397 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 CNTD2Q9H8S5 307 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 NDE1Q9NXR1 346 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 ACTR3BQ9P1U1 418 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 RPUSD1Q9UJJ7 312 aaKnown RBP13.22□□□□□ -0.29
CKS1B-202ENST00000368436 N6AMT1Q9Y5N5 214 aa13.22□□□□□ -0.29
CKS1B-202ENST00000368436 IGHV3OR15-7A0A075B7D8 119 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.21□□□□□ -0.29
CKS1B-202ENST00000368436 MUC1P15941 1255 aaPredicted RBP13.21□□□□□ -0.29
CKS1B-202ENST00000368436 ATP6V1B2P21281 511 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 SLC15A1P46059 708 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 IER3P46695 156 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 CX3CR1P49238 355 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 CDONQ4KMG0 1287 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 WDR82Q6UXN9 313 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 CYP2R1Q6VVX0 501 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 DPY19L4Q7Z388 723 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 CPLX4Q7Z7G2 160 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 OR2T33Q8NG76 320 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 ST8SIA4Q92187 359 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 DMRTB1Q96MA1 342 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 SP140LQ9H930 580 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 KPTNQ9Y664 436 aa13.21□□□□□ -0.29
CKS1B-202ENST00000368436 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 hCG_38984A0A1B0GV85 526 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 TCRBV5S2A0A599 114 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 TBX1O43435 398 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 GPR137BO60478 399 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 TIPRLO75663 272 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 IGHV4-59P01825 116 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 APOC1P02654 83 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 ANXA2P07355 339 aaKnown RBP13.2□□□□□ -0.3
CKS1B-202ENST00000368436 KRTAP10-3P60369 221 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 PPP1R8Q12972 351 aaKnown RBP13.2□□□□□ -0.3
CKS1B-202ENST00000368436 EIF2B1Q14232 305 aaKnown RBP13.2□□□□□ -0.3
CKS1B-202ENST00000368436 TIGD6Q17RP2 521 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 MICBQ29980 383 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 MICAQ29983 383 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 KLHL12Q53G59 568 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 WDR38Q5JTN6 314 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 RHOUQ7L0Q8 258 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 FGFRL1Q8N441 504 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 OR52H1Q8NGJ2 320 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 OR6K6Q8NGW6 343 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 RNF133Q8WVZ7 376 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 REEP6Q96HR9 211 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 CCL13Q99616 98 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 ABHD6Q9BV23 337 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 TLNRD1Q9H1K6 362 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 MAGIXQ9H6Y5 334 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 VNN3Q9NY84 501 aa13.2□□□□□ -0.3
CKS1B-202ENST00000368436 A0A1B0GVI7 797 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 A0A1B0GW55 424 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 SOX14O95416 240 aa13.19□□□□□ -0.3
CKS1B-202ENST00000368436 IFNGP01579 166 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms