RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ZMAT5Q9UDW3 170 aaKnown RBP1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 PSME2Q9UL46 239 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF257Q9Y2Q1 563 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 SAR1BQ9Y6B6 198 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 SCN4AP35499 1836 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 ADGRA3Q8IWK6 1321 aa1.86□□□□□ -2.11
ECHDC1-201ENST00000368287 IGLV3-12A0A075B6K2 115 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 ARPC4-TTLL3A0A0A6YYG9 625 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 IGHV7-4-1A0A0J9YVY3 117 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 A0A1W2PRD5 423 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 TNFRSF11BO00300 401 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 CASC3O15234 703 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 CHST10O43529 356 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 MPDU1O75352 247 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 CD74P04233 296 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 GLAP06280 429 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 TACSTD2P09758 323 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF688P0C7X2 276 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 RALBP11234 206 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 TALDO1P37837 337 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 MAGEA1P43355 309 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 CMC4P56277 68 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 CLDN18P56856 261 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF616Q08AN1 781 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 PNOCQ13519 176 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 PIGHQ14442 188 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 TTC19Q6DKK2 380 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 OTUD6AQ7L8S5 288 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 UNC93AQ86WB7 457 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 RAB43Q86YS6 212 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 MYOCDQ8IZQ8 938 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 INO80EQ8NBZ0 244 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 PROKR2Q8NFJ6 384 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 OR4M1Q8NGD0 313 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 OR1J4Q8NGS1 313 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 RXFP4Q8TDU9 374 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 ISOC2Q96AB3 205 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 ISG20Q96AZ6 181 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 FAM19A4Q96LR4 140 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 C9orf72Q96LT7 481 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 AGMATQ9BSE5 352 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 IQCGQ9H095 443 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 DEFB129Q9H1M3 183 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 NCOR1P1Q9H4R4 102 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 CD209Q9NNX6 404 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 MCUBQ9NWR8 336 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 MARCOQ9UEW3 520 aaPredicted RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 DDX19BQ9UMR2 479 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 FARSAQ9Y285 508 aaKnown RBP1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 S4R3C0 116 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 LOXHD1Q8IVV2 1947 aa1.85□□□□□ -2.11
ECHDC1-201ENST00000368287 LGALS9O00182 355 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 XRCC2O43543 280 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 CTNSO60931 367 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 FARS2O95363 451 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 IGLV2-8P01709 118 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 IGHV3-11P01762 117 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 THRAP10827 490 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 GZMAP12544 262 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 CELP19835 753 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 RAB5AP20339 215 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 CFHR2P36980 270 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 DAOAP59103 153 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 DNAJC3Q13217 504 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 DOC2AQ14183 400 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 TEX30Q5JUR7 227 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 PRR9Q5T870 116 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 AP1ARQ63HQ0 302 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 RTL4Q6ZR62 310 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 MRPL21Q7Z2W9 205 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 ZNF101Q8IZC7 436 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 C19orf18Q8NEA5 215 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 OR5T1Q8NG75 326 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 OR13G1Q8NGZ3 307 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 OR10G6Q8NH81 332 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 ITFG1Q8TB96 612 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 PHF10Q8WUB8 498 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 NAT6Q93015 286 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 CPNE4Q96A23 557 aaPredicted RBP1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 CSPG4P5Q96PW8 444 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 RSG1Q9BU20 258 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 BLZF1Q9H2G9 400 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 C1orf198Q9H425 327 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 SVILO95425 2214 aa1.84□□□□□ -2.11
ECHDC1-201ENST00000368287 BAZ2AQ9UIF9 1905 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 A0A0A6YYD5 115 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 LOC100653049A0A140TA62 436 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 SLC22A20A6NK97 555 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 KRT34O76011 436 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 TRBV12-3P01733 135 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 SRMP19623 302 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 GABRR2P28476 465 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 CCT6AP40227 531 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 PEX19P40855 299 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 BCAP31P51572 246 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 PAFAH1B2P68402 229 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 ELF3P78545 371 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 LCN2P80188 198 aa1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 PPIDQ08752 370 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-201ENST00000368287 OR1Q1Q15612 314 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms