RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 TRIM77I1YAP6 450 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 MFNGO00587 321 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 CDK2AP1O14519 115 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 TP53I11O14683 189 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 TIAF1O95411 115 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 HCKP08631 526 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 QDPRP09417 244 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 IGFBP4P22692 258 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 FPR2P25090 351 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 AVPR2P30518 371 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 CDAP32320 146 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 OR3A4PP47883 348 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 ECH1Q13011 328 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 MFAP5Q13361 173 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 PLAC9Q5JTB6 97 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 KCTD9Q7L273 389 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 FAM89BQ8N5H3 189 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 ZNF283Q8N7M2 679 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 PNLDC1Q8NA58 520 aaKnown RBP12.62□□□□□ -0.39
CD48-201ENST00000368045 TMEM104Q8NE00 496 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
CD48-201ENST00000368045 ATXN7L1Q9ULK2 861 aaPredicted RBP12.62□□□□□ -0.39
CD48-201ENST00000368045 A0A1W2PNR3 127 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 C5orf51A6NDU8 294 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 SMAD9O15198 467 aaKnown RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 SOCS1O15524 211 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 CA11O75493 328 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 SFT2D2O95562 160 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 ZNF17P17021 662 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 THBS4P35443 961 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 SERPINF1P36955 418 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 ATXN7L3Q14CW9 347 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 FAM74A1Q5RGS3 127 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 RTL6Q6ICC9 239 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 PTCRAQ6ISU1 281 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 FAM122CQ6P4D5 195 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 PEG10Q86TG7 708 aaKnown RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 TDHQ8IZJ6 230 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 OR5H2Q8NGV7 314 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 OR14K1Q8NGZ2 314 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 FAM71F1Q96KD3 344 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 ZNF75AQ96N20 296 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 RASL10BQ96S79 203 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 SPAG17Q6Q759 2223 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 A0A0U1RQV5 110 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 NUDT19A8MXV4 375 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 EEF1E1-BLOC1S5C9J1V9 151 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 RER1O15258 196 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 TPD52L2O43399 206 aaKnown RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 CRTAPO75718 401 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 ZNF133P52736 654 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 TMEM50BP56557 158 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 TAS2R46P59540 309 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 PPA1Q15181 289 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 TMEM176BQ3YBM2 270 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 CARD17Q5XLA6 110 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 FOXL2NBQ6ZUU3 175 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 FAM57BQ71RH2 274 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 GTPBP8Q8N3Z3 284 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 GPER1Q99527 375 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 UBE2ZQ9H832 354 aaPredicted RBP12.61□□□□□ -0.39
CD48-201ENST00000368045 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
CD48-201ENST00000368045 XIRP2A4UGR9 3374 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 MPTX1A8MV57 137 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 ZNF814B7Z6K7 855 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 FGF16O43320 207 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 LYL1P12980 280 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 TPT1P13693 172 aaKnown RBP12.6□□□□□ -0.39
CD48-201ENST00000368045 CTRB1P17538 263 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 MSR1P21757 451 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 EPHA8P29322 1005 aaPredicted RBP12.6□□□□□ -0.39
CD48-201ENST00000368045 GUCA1AP43080 201 aaPredicted RBP12.6□□□□□ -0.39
CD48-201ENST00000368045 CTRB2Q6GPI1 263 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 Q6ZSR3 168 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 TMPPEQ6ZT21 453 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 Q7L0L9 218 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 LHFPL1Q86WI0 220 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 SLC30A7Q8NEW0 376 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 OR5AP2Q8NGF4 316 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 OR2I1PQ8NGU4 316 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 PP6455Q8WZ26 134 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 C10orf35Q96D05 121 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 PGAM5Q96HS1 289 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 SPACA5Q96QH8 159 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 MS4A7Q9GZW8 240 aaPredicted RBP12.6□□□□□ -0.39
CD48-201ENST00000368045 ZNF319Q9P2F9 582 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 WNT16Q9UBV4 365 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 NXT1Q9UKK6 140 aaKnown RBP12.6□□□□□ -0.39
CD48-201ENST00000368045 CSAG2Q9Y5P2 127 aa12.6□□□□□ -0.39
CD48-201ENST00000368045 FLVCR1Q9Y5Y0 555 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms