RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 GABRG2P18507 467 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 RAB40BQ12829 278 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 SFRP5Q5T4F7 317 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 RPS27LQ71UM5 84 aaKnown RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 OR4K13Q8NH42 304 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 LKAAEAR1Q8TD35 194 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 SAMD8Q96LT4 415 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 PACRGQ96M98 296 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 NDFIP1Q9BT67 221 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 PSMG3Q9BT73 122 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 PLK3Q9H4B4 646 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 OR4C46A6NHA9 309 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 EIF4E2O60573 245 aaKnown RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 NDUFB2O95178 105 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 OR10A3P58181 314 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 NXPH1P58417 271 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 DOC2BQ14184 412 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 RTP5Q14D33 572 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM196Q5HYL7 178 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 C10orf126Q8N4M7 172 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 OR13D1Q8NGV5 346 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 LRRC15Q8TF66 581 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 FGF14Q92915 247 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 KNTC1P50748 2209 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 IGKV6-21A0A0C4DH24 114 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 C1QBP02746 253 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TYMSP04818 313 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 FOLR1P15328 257 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 LIPAP38571 399 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 RPS18P62269 152 aaKnown RBP7.83□□□□□ -1.16
SYNE1-206ENST00000367253 CDC20Q12834 499 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 ISXQ2M1V0 245 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 CTSL3PQ5NE16 218 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SYT6Q5T7P8 510 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-206ENST00000367253 LYPD4Q6UWN0 246 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TNFRSF13CQ96RJ3 184 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 KIR3DX1Q9H7L2 352 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 C1orf123Q9NWV4 160 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 PIGLQ9Y2B2 252 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 MMP24Q9Y5R2 645 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 GPR39O43194 453 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 XRCC3O43542 346 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 ACKR3P25106 362 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 GZMKP49863 264 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 RAB11AP62491 216 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 MLLT11Q13015 90 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TESK1Q15569 626 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 RTL8BQ17RB0 113 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 LEG1Q6P5S2 330 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 GCNT2Q8N0V5 402 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SPTY2D1-AS1A0A0U1RR47 76 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 CDHR4A6H8M9 788 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TUSC2O75896 110 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 POU3F3P20264 500 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-206ENST00000367253 PCSK6P29122 969 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TAS2R46P59540 309 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 MFGE8Q08431 387 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-206ENST00000367253 OGFOD3Q6PK18 319 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 Q6ZS52 159 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 CPOQ8IVL8 374 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SLC35F2Q8IXU6 374 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 MRGPRX3Q96LB0 322 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SGK494Q96LW2 274 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 ABHD1Q96SE0 405 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 CTDSP1Q9GZU7 261 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 R3HDMLQ9H3Y0 253 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 STYXL1Q9Y6J8 313 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 FEZF1A0PJY2 475 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 RNASEK-C17orf49H0YIS7 233 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 IFNL4K9M1U5 179 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 NME2P1O60361 137 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 HTR2CP28335 458 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 CD1CP29017 333 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 RAG2P55895 527 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 MFAP5Q13361 173 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 PMS2P11Q13670 270 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 MOGAT2Q3SYC2 334 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TP53I3Q53FA7 332 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 NCR3LG1Q68D85 454 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TAS1R1Q7RTX1 841 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 YRDCQ86U90 279 aaKnown RBP7.83□□□□□ -1.16
SYNE1-206ENST00000367253 KRTCAP2Q8N6L1 136 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 Q8NFD4 153 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 OR5B3Q8NH48 314 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 CLEC4CQ8WTT0 213 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 TTC9Q92623 222 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SEC22AQ96IW7 307 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SPNS1Q9H2V7 528 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SMOC1Q9H4F8 434 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 PAM16Q9Y3D7 125 aa7.83□□□□□ -1.16
SYNE1-206ENST00000367253 SEMA7AO75326 666 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 OR5H8P0DN80 308 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ABCD3P28288 659 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 C21orf33P30042 268 aaPredicted RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 APOBEC1P41238 236 aaKnown RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 PTGFRP43088 359 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 ENDOGQ14249 297 aaKnown RBP7.82□□□□□ -1.16
SYNE1-206ENST00000367253 RNFT1Q5M7Z0 435 aa7.82□□□□□ -1.16
SYNE1-206ENST00000367253 NCBP2-AS2Q69YL0 99 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms