RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CFAP77Q6ZQR2 320 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 SLC35D2Q76EJ3 337 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 HIST3H2AQ7L7L0 130 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 AAED1Q7RTV5 226 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 ABHD12BQ7Z5M8 362 aaPredicted RBP6.67□□□□□ -1.34
YBX3-204ENST00000366290 HIPK1Q86Z02 1210 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 C10orf67Q8IYJ2 551 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 CDK20Q8IZL9 346 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 UBE2J2Q8N2K1 259 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 SVOPLQ8N434 492 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 CLDN22Q8N7P3 220 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 WDR31Q8NA23 367 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 ICA1LQ8NDH6 482 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 OR4Q3Q8NH05 313 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 OR6X1Q8NH79 312 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 FANK1Q8TC84 345 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 MAGEE2Q8TD90 523 aaPredicted RBP6.67□□□□□ -1.34
YBX3-204ENST00000366290 HIST1H2ACQ93077 130 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 SAMD8Q96LT4 415 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 Q96M85 177 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 TSPAN32Q96QS1 320 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 OR2M2Q96R28 347 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 CCL19Q99731 98 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 KATNB1Q9BVA0 655 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 TXNIPQ9H3M7 391 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 INIPQ9NRY2 104 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 ZNF701Q9NV72 531 aaPredicted RBP6.67□□□□□ -1.34
YBX3-204ENST00000366290 HIF1ANQ9NWT6 349 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 ZNF346Q9UL40 294 aaKnown RBP6.67□□□□□ -1.34
YBX3-204ENST00000366290 CDH10Q9Y6N8 788 aa6.67□□□□□ -1.34
YBX3-204ENST00000366290 IGKV1D-43A0A0B4J1Z2 117 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 SHISA9B4DS77 424 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 E9PQ18 207 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 BHLHE40O14503 412 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 IMPA2O14732 288 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 UPK3AO75631 287 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 TRMUO75648 421 aaKnown RBP6.66□□□□□ -1.34
YBX3-204ENST00000366290 RAD51DO75771 328 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 PPP1R3DO95685 299 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 BAG2O95816 211 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 TXNDC12O95881 172 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 ALPLP05186 524 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 PGA4P0DJD7 388 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 PGA3P0DJD8 388 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 ANXA8P13928 327 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 PTAFRP25105 342 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 SH3BGRP55822 239 aaPredicted RBP6.66□□□□□ -1.34
YBX3-204ENST00000366290 BIDP55957 195 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 RPL27P61353 136 aaKnown RBP6.66□□□□□ -1.34
YBX3-204ENST00000366290 IL1RL1Q01638 556 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 COX10Q12887 443 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 CAMK2DQ13557 499 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 STK11Q15831 433 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 HIST3H3Q16695 136 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 SLC36A3Q495N2 470 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 ZNF672Q499Z4 452 aaPredicted RBP6.66□□□□□ -1.34
YBX3-204ENST00000366290 MESTQ5EB52 335 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 NIPAL3Q6P499 406 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 DPY19L2P2Q6ZN68 376 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 C20orf196Q8IYI0 205 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 PARP8Q8N3A8 854 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 ARIH2OSQ8N7S6 290 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 STMN2Q93045 179 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 TMEM54Q969K7 222 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 RASD2Q96D21 266 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 LRR1Q96L50 414 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 ALKBH3Q96Q83 286 aaPredicted RBP6.66□□□□□ -1.34
YBX3-204ENST00000366290 DDOQ99489 341 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 SLC29A1Q99808 456 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 CIB1Q99828 191 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 SMR3AQ99954 134 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 OSBPL10Q9BXB5 764 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 MRPL13Q9BYD1 178 aaKnown RBP6.66□□□□□ -1.34
YBX3-204ENST00000366290 UBTD1Q9HAC8 227 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 SLC17A5Q9NRA2 495 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 USE1Q9NZ43 259 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 AMDHD2Q9Y303 409 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 ABCA1O95477 2261 aa6.66□□□□□ -1.34
YBX3-204ENST00000366290 HIVEP2P31629 2446 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 JMJD1CQ15652 2540 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 ARPC4-TTLL3A0A0A6YYG9 625 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 A0A1W2PRG6 482 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 CIB4A0PJX0 185 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 ZNF587BE7ETH6 402 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 DLGAP1O14490 977 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 EI24O14681 340 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 CASQ2O14958 399 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 ARPC3O15145 178 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 ARHGEF9O43307 516 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 MGRN1O60291 552 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 SMPD2O60906 423 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 TPPPO94811 219 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 BCL10O95999 233 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 ACADSP16219 412 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 GSTM3P21266 225 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 C21orf33P30042 268 aaPredicted RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 SLC6A6P31641 620 aa6.65□□□□□ -1.34
YBX3-204ENST00000366290 RPL4P36578 427 aaKnown RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 POLR2IP36954 125 aaKnown RBP6.65□□□□□ -1.34
YBX3-204ENST00000366290 CDKN2AP42771 156 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms