RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TLCD1Q96CP7 247 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 THOC1Q96FV9 657 aaKnown RBP4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 POM121L2Q96KW2 1035 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 COG8Q96MW5 612 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 PRSS27Q9BQR3 290 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF426Q9BUY5 554 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 MRPL13Q9BYD1 178 aaKnown RBP4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR2J1Q9GZK6 312 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 EGLN1Q9GZT9 426 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 KCNN2Q9H2S1 579 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 EVA1AQ9H8M9 152 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 NANOGQ9H9S0 305 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 TMBIM4Q9HC24 238 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 MEPEQ9NQ76 525 aaPredicted RBP4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 MMP26Q9NRE1 261 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 INIPQ9NRY2 104 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 C20orf141Q9NUB4 165 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 EIF3KQ9UBQ5 218 aaKnown RBP4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF69Q9UC07 566 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 LEF1Q9UJU2 399 aaPredicted RBP4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 UGT2A1Q9Y4X1 527 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 GMEB1Q9Y692 573 aa4.33□□□□□ -1.72
RNU4-4P-201ENST00000364588 IGHV3OR16-10A0A075B7F0 116 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 IGLV5-52A0A0A0MRZ9 124 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 TRAPPC2LH3BP13 241 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ANGPT2O15123 496 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 TIMM8AO60220 97 aaPredicted RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 PIP5K1CO60331 668 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ERLIN1O75477 346 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 FOXH1O75593 365 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR7A10O76100 309 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 TGDSO95455 350 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 PPP1R3DO95685 299 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 IGHV2-70P01814 119 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 MT-ND1P03886 318 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 PRTN3P24158 256 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 LAP3P28838 519 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 PCGF2P35227 344 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ATP4BP51164 291 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 DAP3P51398 398 aaKnown RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF133P52736 654 aaPredicted RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 CRYBA2P53672 197 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 TAS2R41P59536 307 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 MRPS34P82930 218 aaKnown RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 TNFAIP6P98066 277 aaPredicted RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 PSG4Q00888 419 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 DEFA6Q01524 100 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLC3A1Q07837 685 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF154Q13106 437 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 BAMBIQ13145 260 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 TAF11Q15544 211 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 KLF17Q5JT82 389 aaPredicted RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 C10orf128Q5T292 105 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ARMC4Q5T2S8 1044 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF774Q6NX45 483 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLC25A47Q6Q0C1 308 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 PRSS45Q7RTY3 260 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 NR2C2APQ86WQ0 139 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 MICU2Q8IYU8 434 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 DEFB108BQ8NET1 73 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR10A6Q8NH74 314 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 LRRC8CQ8TDW0 803 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 LRRC58Q96CX6 371 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SGTBQ96EQ0 304 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 MPP4Q96JB8 637 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 C7orf26Q96N11 449 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SEPHS2Q99611 448 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 CGREF1Q99674 301 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ARPC5LQ9BPX5 153 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 CCDC28BQ9BUN5 200 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLC19A3Q9BZV2 496 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 OR2H1Q9GZK4 316 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 WNT5BQ9H1J7 359 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF556Q9HAH1 456 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SIAEQ9HAT2 523 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 NTN4Q9HB63 628 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 PURGQ9UJV8 347 aaKnown RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 NUP50Q9UKX7 468 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SH3GLB1Q9Y371 365 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 NDUFAF1Q9Y375 327 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 NPTNQ9Y639 398 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 AUP1Q9Y679 476 aa4.32□□□□□ -1.72
RNU4-4P-201ENST00000364588 MEGF8Q7Z7M0 2845 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 PPIAL4EA0A075B759 164 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 PPIAL4CA0A0B4J2A2 164 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 MDFIC2A0A1B0GVS7 189 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 SH2D7A6NKC9 451 aaPredicted RBP4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 CENPBD1B2RD01 187 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 PPIAL4DF5H284 164 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 H7C1C5 153 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 TIMM23O14925 209 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 SLC25A17O43808 307 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 IGHMP01871 453 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 CD55P08174 381 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 PPIAL4FP0DN26 164 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 ZNF12P17014 697 aa4.31□□□□□ -1.72
RNU4-4P-201ENST00000364588 OMGP23515 440 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms