RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 PAX8Q06710 450 aa14.16□□□□□ -0.14
RAB3IP-202ENST00000362025 GK2Q14410 553 aaPredicted RBP14.16□□□□□ -0.14
RAB3IP-202ENST00000362025 KLBQ86Z14 1044 aa14.16□□□□□ -0.14
RAB3IP-202ENST00000362025 ZMYND19Q96E35 227 aaPredicted RBP14.16□□□□□ -0.14
RAB3IP-202ENST00000362025 TMEM246Q9BRR3 403 aa14.16□□□□□ -0.14
RAB3IP-202ENST00000362025 PNRC2Q9NPJ4 139 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-202ENST00000362025 CYB5R1Q9UHQ9 305 aa14.16□□□□□ -0.14
RAB3IP-202ENST00000362025 LRRC30A6NM36 301 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 ZAR1LA6NP61 321 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 PTGES3LE9PB15 166 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 CDC42P60953 191 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 PAX2Q02962 417 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 ECH1Q13011 328 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 CLEC12AQ5QGZ9 265 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 ZNF620Q6ZNG0 422 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 GNPDA2Q8TDQ7 276 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 ZNF48Q96MX3 618 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 MRPL22Q9NWU5 206 aaKnown RBP14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 MIOXQ9UGB7 285 aa14.15□□□□□ -0.14
RAB3IP-202ENST00000362025 A0A1B0GWJ7 208 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 DNAJC9-AS1A6NH13 148 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 IDH3BO43837 385 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 GNB2P62879 340 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 APH1BQ8WW43 257 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 C1orf147Q96MC9 270 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 EGLN3Q9H6Z9 239 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 SPRY1O43609 319 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 WBP4O75554 376 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 PRTN3P24158 256 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 PYCR1P32322 319 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 TSPAN31Q12999 210 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 MALLQ13021 153 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 BAMBIQ13145 260 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 MAB21L1Q13394 359 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 ZNF181Q2M3W8 571 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 ZNF404Q494X3 552 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 CD300LDQ6UXZ3 194 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 IQCF1Q8N6M8 205 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 NEIL1Q96FI4 390 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 MAP6Q96JE9 813 aa14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 MS4A7Q9GZW8 240 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 SOX21Q9Y651 276 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-202ENST00000362025 CCDC159P0C7I6 412 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 IGHV4-38-2P0DP08 117 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 RPS27P42677 84 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 BTNL3Q6UXE8 466 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 C1orf87Q8N0U7 546 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 CYB561A3Q8NBI2 242 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 C19orf18Q8NEA5 215 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 SGMS2Q8NHU3 365 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 PAK1IP1Q9NWT1 392 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 PCDHGB1Q9Y5G3 927 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 IGHV2-70DA0A0C4DH43 119 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 TVP23AA6NH52 213 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 HKR1P10072 659 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 CPT2P23786 658 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 GATA4P43694 442 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 TPTEP56180 551 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 PRAMEF6Q5VXH4 476 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 LYPD2Q6UXB3 125 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 LRRN1Q6UXK5 716 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 PGAP1Q75T13 922 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 OR8B3Q8NGG8 313 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 OR10S1Q8NGN2 331 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 SPRYD4Q8WW59 207 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 ZNRF4Q8WWF5 429 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 RAB40AQ8WXH6 277 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 PLEKHA8Q96JA3 519 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 OR8B2Q96RD0 313 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 UFSP2Q9NUQ7 469 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 CDH10Q9Y6N8 788 aa14.13□□□□□ -0.15
RAB3IP-202ENST00000362025 M0R135 149 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 FAM20BO75063 409 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 IRF2P14316 349 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 ZNF823P16415 610 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 ANOS1P23352 680 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 PITPNBP48739 271 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 GABARAPL2P60520 117 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 HOXA4Q00056 320 aaPredicted RBP14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 ZNF773Q6PK81 442 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 LYPD4Q6UWN0 246 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 NLRC3Q7RTR2 1065 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 MRPL21Q7Z2W9 205 aaKnown RBP14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 PROKR2Q8NFJ6 384 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 RHOXF1Q8NHV9 184 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 TEX47Q8TBZ9 253 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 DACT3Q96B18 629 aaPredicted RBP14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 ZNF799Q96GE5 643 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 IL4I1Q96RQ9 567 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 CCDC90BQ9GZT6 254 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 AMBNQ9NP70 447 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 SCN3BQ9NY72 215 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 KCNG2Q9UJ96 466 aa14.12□□□□□ -0.15
RAB3IP-202ENST00000362025 FSTL3O95633 263 aa14.11□□□□□ -0.15
RAB3IP-202ENST00000362025 HTR1AP08908 422 aa14.11□□□□□ -0.15
RAB3IP-202ENST00000362025 PSKH1P11801 424 aa14.11□□□□□ -0.15
RAB3IP-202ENST00000362025 CA6P23280 308 aa14.11□□□□□ -0.15
RAB3IP-202ENST00000362025 CXCR4P61073 352 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms