RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 CHRNA7P36544 502 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 GPM6AP51674 278 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 PXDC1Q5TGL8 231 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 STPG1Q5TH74 334 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 OR13F1Q8NGS4 319 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 PKMYT1Q99640 499 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 HINT3Q9NQE9 182 aaKnown RBP9.86□□□□□ -0.83
CLIP1-203ENST00000361654 FKBP11Q9NYL4 201 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 A4GNTQ9UNA3 340 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 RGPD8O14715 1765 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-203ENST00000361654 IGLV3-25P01717 112 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 H2AFB1P0C5Y9 115 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 AVPR2P30518 371 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 TIGD3Q6B0B8 471 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 OR6S1Q8NH40 331 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 TRBV5-4A0A0C4DH59 114 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 PTBP1P26599 531 aaKnown RBP eCLIP9.86□□□□□ -0.83
CLIP1-203ENST00000361654 OPCMLQ14982 345 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 BTNL8Q6UX41 500 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 OR5R1Q8NH85 324 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 NEIL1Q96FI4 390 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-203ENST00000361654 ACY3Q96HD9 319 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
CLIP1-203ENST00000361654 COLQQ9Y215 455 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-203ENST00000361654 TAAR5O14804 337 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 FCMRO60667 390 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 HOXD4P09016 255 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 OR5H8P0DN80 308 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 ZXDAP98168 799 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 TMEM268Q5VZI3 342 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 CLEC2AQ6UVW9 174 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 PTRH1Q86Y79 214 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 RBM45Q8IUH3 476 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 SIAH3Q8IW03 269 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 WDR31Q8NA23 367 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 OR10D3Q8NH80 312 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 RHOXF1Q8NHV9 184 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 GABRG3Q99928 467 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 RBFOX1Q9NWB1 397 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 NDUFB11Q9NX14 153 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 B9D1Q9UPM9 204 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 MS4A18H0YCH9 400 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 APEHP13798 732 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 KIR2DS2P43631 304 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 FUT7Q11130 342 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 MS4A18Q3C1V0 323 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 NHLRC2Q8NBF2 726 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 OR2I1PQ8NGU4 316 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 YIPF5Q969M3 257 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 NUDT16L1Q9BRJ7 211 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 OR2A25A4D2G3 310 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF716A6NP11 495 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 EDIL3O43854 480 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 FUT3P21217 361 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 RPL13AP40429 203 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 RHBDD2Q6NTF9 364 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 TIPARPQ7Z3E1 657 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 LRRC29Q8WV35 223 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 MED30Q96HR3 178 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 RASL11BQ9BPW5 248 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 RPP25Q9BUL9 199 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 NWD2Q9ULI1 1742 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 NGFP01138 241 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 TCRBP04435 133 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 EMDP50402 254 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 CNN1P51911 297 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 OR2T2Q6IF00 324 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 ACSM6Q6P461 480 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 PAQR6Q6TCH4 344 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 CXXC4Q9H2H0 198 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 UGT2A1Q9Y4X1 527 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 C5P01031 1676 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 IGHV5-51A0A0C4DH38 117 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 LYZL6O75951 148 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 CD1EP15812 388 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 EPHA2P29317 976 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 MDH2P40926 338 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF788Q6ZQV5 615 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 ASCL5Q7RTU5 278 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 LYG1Q8N1E2 194 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 DYNLRB2Q8TF09 96 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 PSENENQ9NZ42 101 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 OR6C3Q9NZP0 311 aa9.85□□□□□ -0.83
CLIP1-203ENST00000361654 YTHDF2Q9Y5A9 579 aaKnown RBP9.85□□□□□ -0.83
CLIP1-203ENST00000361654 ICMTO60725 284 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 SLC51BQ86UW2 128 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 CDH26Q8IXH8 852 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 FAM26EQ8N5C1 309 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 BCL2L2Q92843 193 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 PLA2G12AQ9BZM1 189 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 CRISPLD2Q9H0B8 497 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 SLC2A8Q9NY64 477 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 MTCH2Q9Y6C9 303 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 AQP7P3A6NL99 342 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 ZNF354AO60765 605 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 MGMTP16455 207 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 OR3A4PP47883 348 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 PPP1CBP62140 327 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 SRSF5Q13243 272 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms