RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 Q6ZNX1 250 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 SVBPQ8N300 66 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 RAB33BQ9H082 229 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
LDB3-202ENST00000361373 TRGV10A0A0A0MS01 117 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 MRPS34P82930 218 aaKnown RBP12.07□□□□□ -0.48
LDB3-202ENST00000361373 ZNF674Q2M3X9 581 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 SSX8Q7RTT4 187 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 SMIM15Q7Z3B0 74 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 ARRDC1Q8N5I2 433 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 C17orf47Q8NEP4 570 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 LFNGQ8NES3 379 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 FAM213BQ8TBF2 198 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 CACNA1CQ13936 2221 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 GPNMBQ14956 572 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 LRRC10Q5BKY1 277 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 Q6ZRG5 221 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 MCHR2Q969V1 340 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 SPACA5Q96QH8 159 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 PFDN5Q99471 154 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 DOK1Q99704 481 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 SEC22CQ9BRL7 303 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 C20orf141Q9NUB4 165 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 SLC23A1Q9UHI7 598 aa12.07□□□□□ -0.48
LDB3-202ENST00000361373 TIMM8BQ9Y5J9 83 aaPredicted RBP12.07□□□□□ -0.48
LDB3-202ENST00000361373 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 K7EQM0 130 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 DHRS3O75911 302 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 AVPR2P30518 371 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 PSG6Q00889 435 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 MC2RQ01718 297 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 UBE3DQ7Z6J8 389 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 OR13C5Q8NGS8 318 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 HES7Q9BYE0 225 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 EXOGQ9Y2C4 368 aaKnown RBP12.06□□□□□ -0.48
LDB3-202ENST00000361373 SHISA8B8ZZ34 492 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
LDB3-202ENST00000361373 PLPP2O43688 288 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 SLC37A1P57057 533 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 ISXQ2M1V0 245 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 FAM74A1Q5RGS3 127 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 ZG16BQ96DA0 208 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 TMEM30CPA0ZSE6 113 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 OR2M5A3KFT3 312 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 SLC7A6Q92536 515 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 FRZBQ92765 325 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 MRPS24Q96EL2 167 aaKnown RBP12.06□□□□□ -0.48
LDB3-202ENST00000361373 MYOZ1Q9NP98 299 aaPredicted RBP12.06□□□□□ -0.48
LDB3-202ENST00000361373 COPS3Q9UNS2 423 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 WNK3Q9BYP7 1800 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 NDUFB3O43676 98 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 IGHA2P01877 340 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 CLINT1Q14677 625 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 POU4F3Q15319 338 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 SLC30A7Q8NEW0 376 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 CA5BP1Q8WTZ4 195 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 GALMQ96C23 342 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 CCL27Q9Y4X3 112 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 BRWD1Q9NSI6 2320 aa12.06□□□□□ -0.48
LDB3-202ENST00000361373 TNFSF12O43508 249 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 TMIGD3P0DMS9 266 aaPredicted RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 FCGR2CP31995 323 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 SOX18P35713 384 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 TRAT1Q6PIZ9 186 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 CREB3L2Q70SY1 520 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 SMIM4Q8WVI0 70 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 PELI1Q96FA3 418 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 TAAR6Q96RI8 345 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 ESRP2Q9H6T0 727 aaKnown RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 OR2F2O95006 317 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 OPRM1P35372 400 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 OR2F1Q13607 317 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 CBLN3Q6UW01 205 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 CELF2-AS1Q8N7Q2 184 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 NUDCD2Q8WVJ2 157 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 GNPNAT1Q96EK6 184 aaPredicted RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 TSPAN32Q96QS1 320 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 ADAT1Q9BUB4 502 aaKnown RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 COMMD5Q9GZQ3 224 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 AMDHD2Q9Y303 409 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 FAM96BQ9Y3D0 163 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 KRBOX1C9JBD0 128 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 GMDSO60547 372 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 AQP8O94778 261 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 LSM6P62312 80 aaKnown RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 TRILQ7L0X0 811 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 RNF167Q9H6Y7 350 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 PLEKHA2Q9HB19 425 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 FBXO34Q9NWN3 711 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 RNF150Q9ULK6 438 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 FER1L6Q2WGJ9 1857 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 HPNP05981 417 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 ERHP84090 104 aaKnown RBP12.05□□□□□ -0.48
LDB3-202ENST00000361373 CMTM2Q8TAZ6 248 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 HPSE2Q8WWQ2 592 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms