RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 KIR2DS4P43632 304 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 KIR2DS1Q14954 304 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 ELAVL1Q15717 326 aaKnown RBP12.56□□□□□ -0.4
SMC5-201ENST00000361138 OR4A16Q8NH70 328 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 IL21Q9HBE4 155 aa12.56□□□□□ -0.4
SMC5-201ENST00000361138 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 MRPL38Q96DV4 380 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 C6orf106Q9H6K1 298 aaPredicted RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 PRAMEF25A6NGN4 478 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 FIGNL2A6NMB9 653 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 SEC14L6B5MCN3 397 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 CTXN2P0C2S0 81 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 CDKN2AP42771 156 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 RPL7L1Q6DKI1 246 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 AAED1Q7RTV5 226 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 MMP25Q9NPA2 562 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 MRM2Q9UI43 246 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 ST6GALNAC2Q9UJ37 374 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 CFDP00746 253 aaPredicted RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 ACKR3P25106 362 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 LIMS1P48059 325 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 ZNF121P58317 390 aaPredicted RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 MAGT1Q9H0U3 335 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 HIPK2Q9H2X6 1198 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 ARPC3O15145 178 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 OR8U8P0C7N1 319 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 ADPRHP54922 357 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 RANP62826 216 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 ENDOGQ14249 297 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 IQCJQ1A5X6 159 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 PRAMEF20Q5VT98 475 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 OR52N4Q8NGI2 321 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 INTS12Q96CB8 462 aaKnown RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 SIRT4Q9Y6E7 314 aaPredicted RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 PRKNO60260 465 aaPredicted RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 GDF1P27539 372 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 EIF4EBP2Q13542 120 aaPredicted RBP12.55□□□□□ -0.4
SMC5-201ENST00000361138 SLC25A42Q86VD7 318 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 V9GYS6 101 aa12.55□□□□□ -0.4
SMC5-201ENST00000361138 FRG2CA6NGY1 282 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
SMC5-201ENST00000361138 OR2J2O76002 312 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 CRHP06850 196 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
SMC5-201ENST00000361138 LSM11P83369 360 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMC5-201ENST00000361138 CATSPERDQ86XM0 798 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 GCNT2Q8N0V5 402 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 LIPHQ8WWY8 451 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 FRRS1LQ9P0K9 344 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 FBXL17Q9UF56 701 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 SBF2Q86WG5 1849 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 NKX2-2O95096 273 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 AGFG1P52594 562 aaKnown RBP12.54□□□□□ -0.4
SMC5-201ENST00000361138 Q5BKY6 102 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 Q7L0L9 218 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 ZNF383Q8NA42 475 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 OR51F2Q8NH61 342 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 NTNG2Q96CW9 530 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 ACTR3CQ9C0K3 210 aaPredicted RBP12.54□□□□□ -0.4
SMC5-201ENST00000361138 MED29Q9NX70 200 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 HCFC2Q9Y5Z7 792 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 FAM221AA4D161 298 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 FOLR3P41439 243 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 ZNF90Q03938 601 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 GVQW1Q8N7I0 195 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 A0A1W2PPQ1 181 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 TLCD2A6NGC4 264 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 CD63P08962 238 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 CPT1CQ8TCG5 803 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 GPR119Q8TDV5 335 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 LHX4Q969G2 390 aa12.54□□□□□ -0.4
SMC5-201ENST00000361138 DAZAP1Q96EP5 407 aaKnown RBP12.54□□□□□ -0.4
SMC5-201ENST00000361138 MCTS1Q9ULC4 181 aaKnown RBP12.54□□□□□ -0.4
SMC5-201ENST00000361138 FAM74A7A6NL05 159 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 TNFRSF10CO14798 259 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 MRPL33O75394 65 aaKnown RBP12.53□□□□□ -0.4
SMC5-201ENST00000361138 ECH1Q13011 328 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 FAM74A3Q4VXF1 159 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 NHLRC3Q5JS37 347 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 LINC01555Q8NAE3 123 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 ZNF845Q96IR2 970 aaPredicted RBP12.53□□□□□ -0.4
SMC5-201ENST00000361138 ADAT1Q9BUB4 502 aaKnown RBP12.53□□□□□ -0.4
SMC5-201ENST00000361138 UCK1Q9HA47 277 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 ARG1P05089 322 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 VSIG10L2P0DP72 767 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 ABOP16442 354 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 PRICKLE4Q2TBC4 344 aa12.53□□□□□ -0.4
SMC5-201ENST00000361138 NUBPLQ8TB37 319 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms