RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 SIRPB1O00241 398 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 CYBAP13498 195 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 CHRNA7P36544 502 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 ERVS71-1P61550 626 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 TOE1Q96GM8 510 aaKnown RBP12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 ADGRG7Q96K78 797 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 LPAR3Q9UBY5 353 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 PRSS37A4D1T9 235 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 M0R135 149 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 TOX3O15405 576 aaPredicted RBP12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 TCF21O43680 179 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 APOBEC1P41238 236 aaKnown RBP12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 ACVR1Q04771 509 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OTPQ5XKR4 325 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF799Q96GE5 643 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 GMLQ99445 158 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 NRASP01111 189 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OPN1MWP04001 364 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OR5AL1P0C617 328 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OPN1MW2P0DN77 364 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OPN1MW3P0DN78 364 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 B2MP61769 119 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 FAM209BQ5JX69 171 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 STUMQ69YW2 141 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OR2M7Q8NG81 312 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF426Q9BUY5 554 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 TEX101Q9BY14 249 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 DHCR7Q9UBM7 475 aaKnown RBP12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 MTFP1Q9UDX5 166 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 DSCR3O14972 297 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 TBX19O60806 448 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 DAOP14920 347 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 CD1CP29017 333 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 MVDP53602 400 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 MLF2Q15773 248 aaPredicted RBP12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 SP6Q3SY56 376 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OR5AS1Q8N127 324 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 SNX22Q96L94 193 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OBP2AQ9NY56 170 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 FMN2Q9NZ56 1722 aa12.13□□□□□ -0.47
CCDC144A-203ENST00000360495 OR5H15A6NDH6 313 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 OR5H1A6NKK0 313 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SERPINE3A8MV23 424 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 GFYI3L273 518 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SCRG1O75711 98 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC37A1P57057 533 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 DMWDQ09019 674 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 INSL4Q14641 139 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 FAM78BQ5VT40 261 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 NXPE3Q969Y0 559 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 KCND3Q9UK17 655 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SEMG1P04279 462 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 DRD1P21728 446 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 PAX5Q02548 391 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 MYPOPQ86VE0 399 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 S1PR5Q9H228 398 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 DAPP1Q9UN19 280 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 C9orf170A2RU37 121 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 MAP1LC3B2A6NCE7 125 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 M0R1X1 148 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SH2D1BO14796 132 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SFT2D2O95562 160 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 PCMT1P22061 227 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC6A1P30531 599 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 CD96P40200 585 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 FAM3AP98173 230 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 TIAL1Q01085 375 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 HES1Q14469 280 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 AGERQ15109 404 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC25A43Q8WUT9 341 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 MAP1LC3BQ9GZQ8 125 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 COX7A2P2O60397 106 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 CER1O95813 267 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 GABRA1P14867 456 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 BCORP1Q8N888 145 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 Q9N2K0 584 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 IGLV3-10A0A075B6K4 115 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 DUXBA0A1W2PPF3 345 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 TBXA2RP21731 343 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 TMEM267Q0VDI3 215 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 THEM4Q5T1C6 240 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 PRSS54Q6PEW0 395 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 LANCL2Q9NS86 450 aa12.12□□□□□ -0.47
CCDC144A-203ENST00000360495 ALKAL1Q6UXT8 129 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 PRDM7Q9NQW5 492 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 FBXL17Q9UF56 701 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 BCAT2O15382 392 aaPredicted RBP12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 YIF1AO95070 293 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 FBP1P09467 338 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 GALP22466 123 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 ZNF628Q5EBL2 1059 aa12.11□□□□□ -0.47
CCDC144A-203ENST00000360495 SLC39A5Q6ZMH5 540 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms