RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FAM210AQ96ND0 272 aa4.84□□□□□ -1.64
CD47-201ENST00000355354 DUSP23Q9BVJ7 150 aa4.84□□□□□ -1.64
CD47-201ENST00000355354 FXYD6Q9H0Q3 95 aa4.84□□□□□ -1.64
CD47-201ENST00000355354 HDHD2Q9H0R4 259 aa4.84□□□□□ -1.64
CD47-201ENST00000355354 ZFP57Q9NU63 452 aa4.84□□□□□ -1.64
CD47-201ENST00000355354 SULT2B1O00204 365 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ECDO95905 644 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 RPN2P04844 631 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 IGFBP2P18065 325 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 RAB3BP20337 219 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 WDR25Q64LD2 544 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 KCTD18Q6PI47 426 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 XKRXQ6PP77 449 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 BCL6BQ8N143 479 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 ZNF114Q8NC26 417 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 CCDC54Q8NEL0 328 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 OR6N2Q8NGY6 317 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 OR2AJ1Q8NGZ0 328 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ARHGAP5-AS1Q96IT6 56 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 IGHV1OR21-1A0A087WYE8 117 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 COLCA2A8K830 154 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SYT5O00445 386 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SPRY1O43609 319 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 RAB36O95755 333 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 IGLV2-14P01704 120 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 MELTFP08582 738 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SLC35G4P0C7Q5 338 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 CD1BP29016 333 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 PITPNBP48739 271 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 RAB40BQ12829 278 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SFSWAPQ12872 951 aaKnown RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 EIF3IQ13347 325 aaKnown RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 CDSNQ15517 529 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SLC25A30Q5SVS4 291 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 HBMQ6B0K9 141 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SP5Q6BEB4 398 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 ARMC10Q8N2F6 343 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 OR51G1Q8NGK1 321 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 OR1K1Q8NGR3 316 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FANK1Q8TC84 345 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FGGYQ96C11 551 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ZC3HAV1LQ96H79 300 aaKnown RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 ALKBH3Q96Q83 286 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 CMKLR1Q99788 373 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 CCDC3Q9BQI4 270 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SPATA9Q9BWV2 254 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 MBD2Q9UBB5 411 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 WSB1Q9Y6I7 421 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 A0A1W2PPE2 198 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ANKRD20A5PA0PJZ0 165 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FAM25AB3EWG3 89 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FAM25CB3EWG5 89 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FAM25GB3EWG6 89 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 NDUFA2O43678 99 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 RHBDL1O75783 438 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ATP1B1P05026 303 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 CELA3BP08861 270 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 PIPP12273 146 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 CASRP41180 1078 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 APOBEC1P41238 236 aaKnown RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 RECQLP46063 649 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 IKZF1Q13422 519 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 CXorf66Q5JRM2 361 aaPredicted RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 H3F3CQ6NXT2 135 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 IGFL3Q6UXB1 125 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 HAPLN4Q86UW8 402 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FAM71E2Q8N5Q1 922 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FAM98AQ8NCA5 519 aaKnown RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 TMEM185AQ8NFB2 350 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 WDYHV1Q96HA8 205 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SLC41A2Q96JW4 573 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 GTPBP2Q9BX10 602 aaKnown RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 PIGUQ9H490 435 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SLC25A13Q9UJS0 675 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 TMED5Q9Y3A6 229 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 HECTD4Q9Y4D8 3996 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 CLEC3AO75596 197 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 CLDN14O95500 239 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SLC6A8P48029 635 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SUCLG1P53597 346 aaKnown RBP4.83□□□□□ -1.64
CD47-201ENST00000355354 GABREP78334 506 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 TRA2AQ13595 282 aaKnown RBP eCLIP4.83□□□□□ -1.64
CD47-201ENST00000355354 TAF9Q16594 264 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 FAM201AQ5SY85 155 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 LCTLQ6UWM7 567 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ZNF454Q8N9F8 522 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 SLC2A12Q8TD20 617 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ADAMTS15Q8TE58 950 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 TAF15Q92804 592 aaKnown RBP eCLIP4.83□□□□□ -1.64
CD47-201ENST00000355354 TMEM204Q9BSN7 226 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 MAGT1Q9H0U3 335 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 LPAR5Q9H1C0 372 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 ELOVL3Q9HB03 270 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 GLRX2Q9NS18 164 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 GTF2A1LQ9UNN4 478 aa4.83□□□□□ -1.64
CD47-201ENST00000355354 A0A0B4J2A0 478 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 PHOX2AO14813 284 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 TOX3O15405 576 aaPredicted RBP4.82□□□□□ -1.64
CD47-201ENST00000355354 GPR75O95800 540 aa4.82□□□□□ -1.64
CD47-201ENST00000355354 ZNF169Q14929 603 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms