RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 JAGN1Q8N5M9 183 aa14.97□□□□□ -0.01
VPS13B-201ENST00000355155 MBD3L2Q8NHZ7 208 aaPredicted RBP14.97□□□□□ -0.01
VPS13B-201ENST00000355155 AQP3Q92482 292 aa14.97□□□□□ -0.01
VPS13B-201ENST00000355155 SLC7A6Q92536 515 aa14.97□□□□□ -0.01
VPS13B-201ENST00000355155 POM121L2Q96KW2 1035 aa14.97□□□□□ -0.01
VPS13B-201ENST00000355155 AUNIPQ9H7T9 357 aa14.97□□□□□ -0.01
VPS13B-201ENST00000355155 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.97□□□□□ -0.013e-11■■■■■ 41.3
VPS13B-201ENST00000355155 CLEC4AQ9UMR7 237 aa14.97□□□□□ -0.01
VPS13B-201ENST00000355155 SERPINA5P05154 406 aa14.96□□□□□ -0.01
VPS13B-201ENST00000355155 VSIG8P0DPA2 414 aa14.96□□□□□ -0.01
VPS13B-201ENST00000355155 SLC6A9P48067 706 aa14.96□□□□□ -0.01
VPS13B-201ENST00000355155 FOXG1P55316 489 aaPredicted RBP14.96□□□□□ -0.01
VPS13B-201ENST00000355155 SNRNP27Q8WVK2 155 aaKnown RBP14.96□□□□□ -0.01
VPS13B-201ENST00000355155 POM121Q96HA1 1249 aa14.96□□□□□ -0.01
VPS13B-201ENST00000355155 ZFP3Q96NJ6 502 aa14.96□□□□□ -0.01
VPS13B-201ENST00000355155 NUBP2Q9Y5Y2 271 aa14.96□□□□□ -0.01
VPS13B-201ENST00000355155 CRYABP02511 175 aaKnown RBP14.96□□□□□ -0.02
VPS13B-201ENST00000355155 PDGFAP04085 211 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 EDN3P14138 238 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 MECP2P51608 486 aaKnown RBP14.96□□□□□ -0.02
VPS13B-201ENST00000355155 RIPPLY1Q0D2K3 151 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 UBE2V2Q15819 145 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 EIF2S3LQ2VIR3 472 aaKnown RBP14.96□□□□□ -0.02
VPS13B-201ENST00000355155 C1QTNF12Q5T7M4 302 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 PLET1Q6UQ28 207 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 PLXDC2Q6UX71 529 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 UBASH3BQ8TF42 649 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 NANOS1Q8WY41 292 aaKnown RBP14.96□□□□□ -0.02
VPS13B-201ENST00000355155 PIGTQ969N2 578 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 GPR137Q96N19 417 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 ANAPC10Q9UM13 185 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 LHX6Q9UPM6 363 aa14.96□□□□□ -0.02
VPS13B-201ENST00000355155 FAM240BA0A1B0GVZ2 78 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 MEIOCA2RUB1 952 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 K7ENP7 123 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 FAM3AP98173 230 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 FAPQ12884 760 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 INO80CQ6PI98 192 aaPredicted RBP14.95□□□□□ -0.02
VPS13B-201ENST00000355155 IZUMO1Q8IYV9 350 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 FAM89BQ8N5H3 189 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 PLSCR4Q9NRQ2 329 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 LOC100509620A0A075B734 347 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 ZNF503-AS2A6NEH8 195 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 FOXI3A8MTJ6 420 aaPredicted RBP14.95□□□□□ -0.02
VPS13B-201ENST00000355155 RAB27BO00194 218 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 CHRM2P08172 466 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 MADCAM1Q13477 382 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 DTX3Q8N9I9 347 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 UPRTQ96BW1 309 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 CPNE2Q96FN4 548 aaPredicted RBP14.95□□□□□ -0.02
VPS13B-201ENST00000355155 REPIN1Q9BWE0 567 aaKnown RBP14.95□□□□□ -0.02
VPS13B-201ENST00000355155 SCNM1Q9BWG6 230 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 DPAGT1Q9H3H5 408 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 NOX3Q9HBY0 568 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 NEK6Q9HC98 313 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 PIGLQ9Y2B2 252 aa14.95□□□□□ -0.02
VPS13B-201ENST00000355155 A0A0B4J293 547 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 HMX3A6NHT5 357 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 ACKR3P25106 362 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 ZP1P60852 638 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 FOXC1Q12948 553 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 ZNF260Q3ZCT1 412 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 Q6ZT83 130 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 P4HA3Q7Z4N8 544 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 ZNF584Q8IVC4 421 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 SPACA3Q8IXA5 215 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 TM2D1Q9BX74 207 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 MMP28Q9H239 520 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 HRASLSQ9HDD0 168 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 METTL21EPA6NDL7 271 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 PATE4P0C8F1 98 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 PRKACBP22694 351 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 KIR2DL2P43627 348 aaPredicted RBP14.94□□□□□ -0.02
VPS13B-201ENST00000355155 KRTCAP3Q53RY4 240 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 CLVS2Q5SYC1 327 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 KCNG3Q8TAE7 436 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 FAM46BQ96A09 425 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 ATG5Q9H1Y0 275 aa14.94□□□□□ -0.02
VPS13B-201ENST00000355155 MRPS28Q9Y2Q9 187 aaKnown RBP14.94□□□□□ -0.02
VPS13B-201ENST00000355155 C7orf66A4D0T2 115 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 LCATP04180 440 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 HOXD4P09016 255 aaPredicted RBP14.93□□□□□ -0.02
VPS13B-201ENST00000355155 CSF1P09603 554 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 PMPCAQ10713 525 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 CNN3Q15417 329 aaKnown RBP14.93□□□□□ -0.02
VPS13B-201ENST00000355155 BTN2A1Q7KYR7 527 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 COMMD2Q86X83 199 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 ANGPTL5Q86XS5 388 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 APOBEC3DQ96AK3 386 aaPredicted RBP14.93□□□□□ -0.02
VPS13B-201ENST00000355155 MRPS7Q9Y2R9 242 aaKnown RBP14.93□□□□□ -0.02
VPS13B-201ENST00000355155 WIPF3A6NGB9 483 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 WISP2O76076 250 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 KDM4BO94953 1096 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 CGAP01215 116 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 IGHV3-9P01782 118 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 SRP9P49458 86 aaKnown RBP14.93□□□□□ -0.02
VPS13B-201ENST00000355155 KISS1Q15726 138 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 LPAR5Q9H1C0 372 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 KCNK15Q9H427 330 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 IL36GQ9NZH8 169 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms