RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 KRASP01116 189 aa7.33□□□□□ -1.24
SCN8A-201ENST00000354534 PIGAP37287 484 aa7.33□□□□□ -1.24
SCN8A-201ENST00000354534 TRMT12Q53H54 448 aaKnown RBP7.33□□□□□ -1.24
SCN8A-201ENST00000354534 AGBL4Q5VU57 503 aa7.33□□□□□ -1.24
SCN8A-201ENST00000354534 BAP18Q8IXM2 172 aa7.33□□□□□ -1.24
SCN8A-201ENST00000354534 ZNF778Q96MU6 729 aa7.33□□□□□ -1.24
SCN8A-201ENST00000354534 NPY6RQ99463 290 aa7.33□□□□□ -1.24
SCN8A-201ENST00000354534 TNFRSF19Q9NS68 423 aa7.33□□□□□ -1.24
SCN8A-201ENST00000354534 IGLV3-22A0A075B6J6 115 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ZNF253O75346 499 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 DEFB133Q30KQ1 61 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 PRSS42Q7Z5A4 293 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 GLIS1Q8NBF1 620 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 MRGPRX2Q96LB1 330 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 FAM206AQ9NX38 181 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 PPP1R11O60927 126 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 HAND1O96004 215 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ZNF628Q5EBL2 1059 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 TRAT1Q6PIZ9 186 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 TMEM136Q6ZRR5 245 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 GLCCI1Q86VQ1 547 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 OR52B4Q8NGK2 314 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 OR51F2Q8NH61 342 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 TAS2R4Q9NYW5 299 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 FAM221AA4D161 298 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 KIR2DL1P43626 348 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 KIR2DL2P43627 348 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 HNRNPA1L2Q32P51 320 aaKnown RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 PSAPL1Q6NUJ1 521 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 RTL8AQ9BWD3 113 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ZNFX1Q9P2E3 1918 aaKnown RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 TMPRSS11DO60235 418 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 IGHV4-34P06331 123 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 HINT1P49773 126 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 METAP1P53582 386 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 GCSAMLQ5JQS6 135 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 LEMD1Q68G75 181 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 WDR88Q6ZMY6 472 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 SLC25A46Q96AG3 418 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 PAAF1Q9BRP4 392 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 TFAP2AP05549 437 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 RELBQ01201 579 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 CCL14Q16627 93 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 NKAIN1Q4KMZ8 207 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 C19orf54Q5BKX5 351 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 SLC38A9Q8NBW4 561 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 WDR89Q96FK6 387 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 RASL12Q9NYN1 266 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 IGHV3-9P01782 118 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 PXNP49023 591 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ASCL1P50553 236 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ERVFRD-1P60508 538 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 LMAN2Q12907 356 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ASTLQ6HA08 431 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 CYS1Q717R9 158 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 CCDC190Q86UF4 302 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 KLRG1Q96E93 195 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 WDR83Q9BRX9 315 aaKnown RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ONECUT1Q9UBC0 465 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 Q6ZPB1 254 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 MISPQ8IVT2 679 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 DEFB108BQ8NET1 73 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 A0A0A6YYC8 382 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 I3L1I5 382 aaPredicted RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 SIGIRRQ6IA17 410 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 GJC3Q8NFK1 279 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 SLC25A22Q9H936 323 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 FKBP11Q9NYL4 201 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ATP23Q9Y6H3 246 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 TMEM131LA2VDJ0 1609 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 A0A0J9YY10 115 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 A0A1W2PN81 502 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 CLDN34H7C241 214 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 RRP8O43159 456 aaKnown RBP7.32□□□□□ -1.24
SCN8A-201ENST00000354534 XRCC2O43543 280 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 B4GALT3O60512 393 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 EDN1P05305 212 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 ARR3P36575 388 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 PRLHRP49683 370 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 TSPAN31Q12999 210 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 CYB5R2Q6BCY4 276 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 UMODL1-AS1Q8N2C9 162 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 GABARAPL3Q9BY60 117 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 SLC35B3Q9H1N7 401 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 INSL5Q9Y5Q6 135 aa7.32□□□□□ -1.24
SCN8A-201ENST00000354534 FGF4P08620 206 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 HNRNPA1P09651 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCN8A-201ENST00000354534 ARRB2P32121 409 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 JOSD1Q15040 202 aaPredicted RBP7.31□□□□□ -1.24
SCN8A-201ENST00000354534 LBX2Q6XYB7 198 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 LHFPL2Q6ZUX7 228 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 RNF113BQ8IZP6 322 aaKnown RBP7.31□□□□□ -1.24
SCN8A-201ENST00000354534 FBXL6Q8N531 539 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 MDGA1Q8NFP4 955 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 C2orf50Q96LR7 162 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 PPP1R17O96001 155 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 SPINT3P49223 89 aa7.31□□□□□ -1.24
SCN8A-201ENST00000354534 DAPP51397 102 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms