RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 PHB2Q99623 299 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 TNFSF18Q9UNG2 199 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 LOC100509620A0A075B734 347 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 E9PLN8 166 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 SOCS1O15524 211 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 TDGF1P13385 188 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 PRF1P14222 555 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 IL13RA1P78552 427 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 ACTBL2Q562R1 376 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 VAX1Q5SQQ9 334 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 PHYHD1Q5SRE7 291 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 TMEM123Q8N131 208 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 KCNRGQ8N5I3 272 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 GJC3Q8NFK1 279 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 OR4K15Q8NH41 348 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 NABP1Q96AH0 204 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 PDCD10Q9BUL8 212 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 FN3KRPQ9HA64 309 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 COMMD9Q9P000 198 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 A0A0U1RQV5 110 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 MFNGO00587 321 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 EFSO43281 561 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 ZIC3O60481 467 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 OR2F2O95006 317 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 CD63P08962 238 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 GUCA1AP43080 201 aaPredicted RBP19.48■□□□□ 0.71
UPF3A-201ENST00000351487 RPS27AP62979 156 aaKnown RBP19.48■□□□□ 0.71
UPF3A-201ENST00000351487 UBA52P62987 128 aaKnown RBP19.48■□□□□ 0.71
UPF3A-201ENST00000351487 HIST1H3AP68431 136 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 ZFP36L1Q07352 338 aaKnown RBP19.48■□□□□ 0.71
UPF3A-201ENST00000351487 OR2F1Q13607 317 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 HIST2H3PS2Q5TEC6 136 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 PEAR1Q5VY43 1037 aaPredicted RBP19.48■□□□□ 0.71
UPF3A-201ENST00000351487 RAET1LQ5VY80 246 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 HIST2H3AQ71DI3 136 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 OR56B1Q8NGI3 324 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 OR2I1PQ8NGU4 316 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 ST8SIA4Q92187 359 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 FBXW5Q969U6 566 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 CCDC120Q96HB5 630 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 PGAM5Q96HS1 289 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 LYZL4Q96KX0 146 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 GNRHR2Q96P88 292 aa19.48■□□□□ 0.71
UPF3A-201ENST00000351487 CCSO14618 274 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 DUS4LO95620 317 aaKnown RBP19.47■□□□□ 0.71
UPF3A-201ENST00000351487 OTX1P32242 354 aaPredicted RBP19.47■□□□□ 0.71
UPF3A-201ENST00000351487 ALDH3B1P43353 468 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 TMEM50BP56557 158 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 ECH1Q13011 328 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 GFOD2Q3B7J2 385 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 Q6ZSR3 168 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 OR2Y1Q8NGV0 311 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 ZNF385AQ96PM9 386 aaKnown RBP19.47■□□□□ 0.71
UPF3A-201ENST00000351487 PFDN2Q9UHV9 154 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 POM121CA8CG34 1229 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 CEACAM18A8MTB9 384 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 SPDEFO95238 335 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 PMP2P02689 132 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 TAS2R31P59538 309 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 CSNK2A1P68400 391 aaPredicted RBP19.47■□□□□ 0.71
UPF3A-201ENST00000351487 MC2RQ01718 297 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 BAMBIQ13145 260 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 MICBQ29980 383 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 CRIP3Q6Q6R5 217 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 ARRDC1Q8N5I2 433 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 OR9K2Q8NGE7 335 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 GPER1Q99527 375 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 NAA11Q9BSU3 229 aaPredicted RBP19.47■□□□□ 0.71
UPF3A-201ENST00000351487 URM1Q9BTM9 101 aaKnown RBP19.47■□□□□ 0.71
UPF3A-201ENST00000351487 BANF2Q9H503 90 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 ZNF160Q9HCG1 818 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.47■□□□□ 0.71
UPF3A-201ENST00000351487 GHRLQ9UBU3 117 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 SESN1Q9Y6P5 492 aa19.47■□□□□ 0.71
UPF3A-201ENST00000351487 A0A1W2PP11 408 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 C5orf63A6NC05 138 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 NPIPA2E9PIF3 369 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 NPIPA3F8WFD2 350 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 SMAD9O15198 467 aaKnown RBP19.46■□□□□ 0.71
UPF3A-201ENST00000351487 SCO1O75880 301 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 RLN2P04090 185 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 CCL4P13236 92 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 THBS4P35443 961 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 ARMC10Q8N2F6 343 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 FAM89BQ8N5H3 189 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 PNLDC1Q8NA58 520 aaKnown RBP19.46■□□□□ 0.71
UPF3A-201ENST00000351487 ADAD2Q8NCV1 583 aaKnown RBP19.46■□□□□ 0.71
UPF3A-201ENST00000351487 OR1S1Q8NH92 325 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 MAFAQ8NHW3 353 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-201ENST00000351487 PPP1R1CQ8WVI7 109 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 ST8SIA2Q92186 375 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 OCSTAMPQ9BR26 566 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 FOXD3Q9UJU5 478 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-201ENST00000351487 DKKL1Q9UK85 242 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 V9GYS6 101 aa19.46■□□□□ 0.71
UPF3A-201ENST00000351487 SUCLG1P53597 346 aaKnown RBP19.45■□□□□ 0.7
UPF3A-201ENST00000351487 JMJD6Q6NYC1 403 aaPredicted RBP19.45■□□□□ 0.7
UPF3A-201ENST00000351487 PDZD9Q8IXQ8 264 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 UCN2Q96RP3 112 aa19.45■□□□□ 0.7
UPF3A-201ENST00000351487 C1QTNF6Q9BXI9 259 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms