RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 OR8G2PQ6IF36 304 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 RSPO2Q6UXX9 243 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 NPAS4Q8IUM7 802 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 C2orf73Q8N5S3 287 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 FAM160A2Q8N612 972 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 PLPP7Q8NBV4 271 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 OR51A2Q8NGJ7 313 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 OR5AK2Q8NH90 309 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 SLC2A12Q8TD20 617 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 NKD1Q969G9 470 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 SDSLQ96GA7 329 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 PRSS27Q9BQR3 290 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 GLIPR2Q9H4G4 154 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 FRRS1LQ9P0K9 344 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 RFNGQ9Y644 331 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 FTCDNL1E5RQL4 147 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 SLC11A1P49279 550 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 ARRB1P49407 418 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 KHKP50053 298 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 TBPL1P62380 186 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 VAMP2P63027 116 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 C1orf189Q5VU69 101 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 C2orf15Q8WU43 125 aaKnown RBP9.5□□□□□ -0.89
CAPN3-203ENST00000349748 CCDC74AQ96AQ1 378 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 LHX3Q9UBR4 397 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 SIGLEC7Q9Y286 467 aa9.5□□□□□ -0.89
CAPN3-203ENST00000349748 LOC102724200A0A096LPH7 203 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-203ENST00000349748 LOC100289279A0A1B0GTE1 492 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 SLC16A5O15375 505 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 RCBTB2O95199 551 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 GJB5O95377 273 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 HIST1H1CP16403 213 aaKnown RBP9.49□□□□□ -0.89
CAPN3-203ENST00000349748 NPPBP16860 134 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CTHP32929 405 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 TGM3Q08188 693 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 RAB11BQ15907 218 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 PRSS8Q16651 343 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 ANKRD55Q3KP44 614 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 LRRC73Q5JTD7 316 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 WDR25Q64LD2 544 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-203ENST00000349748 LINC01555Q8NAE3 123 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 OR2L3Q8NG85 312 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 WBP2Q969T9 261 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 TVP23CQ96ET8 276 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 TBX15Q96SF7 602 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CDH20Q9HBT6 801 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 FLRT3Q9NZU0 649 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 GOLGA4Q13439 2230 aaKnown RBP9.49□□□□□ -0.89
CAPN3-203ENST00000349748 PLXNB3Q9ULL4 1909 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 NPIPB15A6NHN6 443 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-203ENST00000349748 TSPAN2O60636 221 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 AHSA1O95433 338 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 KLKB1P03952 638 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CD1AP06126 327 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 MMP9P14780 707 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 AK4P27144 223 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-203ENST00000349748 ALDH3B1P43353 468 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 RND3P61587 244 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CDKN3Q16667 212 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CLEC18BQ6UXF7 455 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 ZDHHC22Q8N966 263 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CMBLQ96DG6 245 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 PGAM5Q96HS1 289 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 TNFRSF13CQ96RJ3 184 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 NIPSNAP3BQ9BS92 247 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CSTL1Q9H114 145 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 PCED1AQ9H1Q7 454 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 SLC26A1Q9H2B4 701 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.49□□□□□ -0.89
CAPN3-203ENST00000349748 LRFN1Q9P244 771 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 LIPGQ9Y5X9 500 aa9.49□□□□□ -0.89
CAPN3-203ENST00000349748 CENPVL1A0A0U1RR11 272 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 A0A1W2PS29 197 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 RBFOX3A6NFN3 312 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ELOA3DA6NLF2 546 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ZNF708P17019 499 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 APOBEC1P41238 236 aaKnown RBP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 NCBP2P52298 156 aaKnown RBP eCLIP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 GNB2P62879 340 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 CEBPEQ15744 281 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ELOA3BQ3SY89 546 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 CTXN3Q4LDR2 81 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 LCN10Q6JVE6 187 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM182Q6ZP80 229 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM156Q8N614 296 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 COX18Q8N8Q8 333 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ELOA3Q8NG57 546 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 OR2L2Q8NH16 312 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 STT3BQ8TCJ2 826 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 ZPLD1Q8TCW7 415 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 RNF128Q8TEB7 428 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM239Q8WW34 195 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 DNASE2BQ8WZ79 361 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 TMEM18Q96B42 140 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 BPIFA2Q96DR5 249 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 SLC35E1Q96K37 410 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 MIEN1Q9BRT3 115 aa9.48□□□□□ -0.89
CAPN3-203ENST00000349748 KLHL28Q9NXS3 571 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms