RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 NAXDQ8IW45 347 aa5.32□□□□□ -1.56
RFC1-201ENST00000349703 ARL11Q969Q4 196 aa5.32□□□□□ -1.56
RFC1-201ENST00000349703 FAM46AQ96IP4 442 aaKnown RBP5.32□□□□□ -1.56
RFC1-201ENST00000349703 GPHA2Q96T91 129 aa5.32□□□□□ -1.56
RFC1-201ENST00000349703 GPA33Q99795 319 aa5.32□□□□□ -1.56
RFC1-201ENST00000349703 OPN3Q9H1Y3 402 aaPredicted RBP5.32□□□□□ -1.56
RFC1-201ENST00000349703 IMP3Q9NV31 184 aaKnown RBP5.32□□□□□ -1.56
RFC1-201ENST00000349703 FBXL3Q9UKT7 428 aa5.32□□□□□ -1.56
RFC1-201ENST00000349703 QSER1Q2KHR3 1735 aa5.32□□□□□ -1.56
RFC1-201ENST00000349703 A0A1W2PRF3 423 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 A0A1W2PRM7 423 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR5B21A6NL26 309 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR1I1O60431 355 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ZNF254O75437 659 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TYMSP04818 313 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 CPN1P15169 458 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 VDAC2P45880 294 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 HOXC5Q00444 222 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ACSF3Q4G176 576 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 TCEAL5Q5H9L2 206 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 RPL7L1Q6DKI1 246 aaKnown RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 LAIR2Q6ISS4 152 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 H3F3CQ6NXT2 135 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 LRRC56Q8IYG6 542 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 BOD1L2Q8IYS8 172 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR4M2Q8NGB6 313 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 LKAAEAR1Q8TD35 194 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 LINC00615Q96LM1 132 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 C8orf49Q96NF6 230 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 CHCHD5Q9BSY4 110 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TAS2R8Q9NYW2 309 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 LSM7Q9UK45 103 aaKnown RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 URGCP-MRPS24S4R325 110 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 COL4A1P02462 1669 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 A0A0G2JMP0 313 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ZNF98A6NK75 572 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ARPC5O15511 151 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 CXorf1O96002 111 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ATP1B1P05026 303 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 DRD5P21918 477 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TIA1P31483 386 aaKnown RBP eCLIP5.31□□□□□ -1.56
RFC1-201ENST00000349703 LEPP41159 167 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 CRYBB2P43320 205 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 NDUFA6P56556 154 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 SLC35B1P78383 322 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 RSU1Q15404 277 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ZNF79Q15937 498 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 MEP1BQ16820 701 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ARL9Q6T311 187 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR52M1Q8NGK5 317 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 THAP6Q8TBB0 222 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 SPANXB1Q9NS25 103 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 ZNF275Q9NSD4 429 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 MED9Q9NWA0 146 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 GDE1Q9NZC3 331 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 DOK5Q9P104 306 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 LY75O60449 1722 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 MYO18AQ92614 2054 aaKnown RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 LRP5LA4QPB2 252 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 E9PLN8 166 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 HLA-DQB1P01920 261 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ATP1B2P14415 290 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 BDKRB1P46663 353 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ADPRHP54922 357 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 BIKQ13323 160 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TPBGQ13641 420 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 SSX1Q16384 188 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 LCN12Q6JVE5 192 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 FAHD2BQ6P2I3 314 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 TEX26Q8N6G2 289 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TMEM52Q8NDY8 209 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR5J2Q8NH18 312 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 FAHD2AQ96GK7 314 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 NIPSNAP1Q9BPW8 284 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 VKORC1Q9BQB6 163 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 EFCAB11Q9BUY7 163 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 RCC2Q9P258 522 aaKnown RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 AK6Q9Y3D8 172 aaKnown RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 RNF114Q9Y508 228 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TRAV24A0A0B4J272 114 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 GAGE12BA1L429 117 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 GAGE12HA6NDE8 117 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR5H15A6NDH6 313 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 K7ERU9 68 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 BCHEP06276 602 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ZNF14P17017 642 aaPredicted RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 MEOX2P50222 304 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 MVDP53602 400 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 RAB8AP61006 207 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 PPIAP62937 165 aaKnown RBP5.31□□□□□ -1.56
RFC1-201ENST00000349703 MGAT3Q09327 533 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ST3GAL3Q11203 375 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 TRAM2Q15035 370 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 ZBTB6Q15916 424 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 CYHR1Q6ZMK1 362 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 CLECL1Q8IZS7 167 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 NAGSQ8N159 534 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 WDR31Q8NA23 367 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR2T4Q8NH00 348 aa5.31□□□□□ -1.56
RFC1-201ENST00000349703 OR52N1Q8NH53 320 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms