RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MAP2K3P46734 347 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 GSK3AP49840 483 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 SCAND1P57086 179 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 SPOCK1Q08629 439 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 RIN1Q13671 783 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 LY6DQ14210 128 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 ZNF79Q15937 498 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 GFOD2Q3B7J2 385 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 CNIH2Q6PI25 160 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 XKRXQ6PP77 449 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 CRIP3Q6Q6R5 217 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 BHLHA15Q7RTS1 189 aaPredicted RBP9.5□□□□□ -0.89
ECM1-201ENST00000346569 PAQR4Q8N4S7 273 aaPredicted RBP9.5□□□□□ -0.89
ECM1-201ENST00000346569 FAM169BQ8N8A8 192 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 OR52N4Q8NGI2 321 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 PP6455Q8WZ26 134 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 APOBEC3DQ96AK3 386 aaPredicted RBP9.5□□□□□ -0.89
ECM1-201ENST00000346569 WBP1Q96G27 269 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 VKORC1Q9BQB6 163 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 ABCG5Q9H222 651 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 PIGMQ9H3S5 423 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 OBP2BQ9NPH6 170 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 TMEM138Q9NPI0 162 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 TBCCD1Q9NVR7 557 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 JKAMPQ9P055 326 aa9.5□□□□□ -0.89
ECM1-201ENST00000346569 hCG_38984A0A1B0GV85 526 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 A0A1W2PR80 420 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 ATXN7O15265 892 aaPredicted RBP9.49□□□□□ -0.89
ECM1-201ENST00000346569 SULT1B1O43704 296 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 EIF4EP06730 217 aaKnown RBP9.49□□□□□ -0.89
ECM1-201ENST00000346569 ZNF20P17024 532 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 RAB3AP20336 220 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 CLDN12P56749 244 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 RIPPLY1Q0D2K3 151 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 OR8B8Q15620 311 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 UBE2V2Q15819 145 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 C2orf76Q3KRA6 126 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 TMEM42Q69YG0 159 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 TMEM211Q6ICI0 200 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 RNF144BQ7Z419 303 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 MYPOPQ86VE0 399 aaPredicted RBP9.49□□□□□ -0.89
ECM1-201ENST00000346569 COMMD2Q86X83 199 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 LIX1LQ8IVB5 337 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 CMTM4Q8IZR5 234 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 SAMD12Q8N8I0 201 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 SLC30A7Q8NEW0 376 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 SEMA6DQ8NFY4 1073 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 OR13C9Q8NGT0 318 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 AKAP1Q92667 903 aaKnown RBP eCLIP9.49□□□□□ -0.89
ECM1-201ENST00000346569 SRRQ9GZT4 340 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 LIN7BQ9HAP6 207 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 ADAM30Q9UKF2 790 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 PIGLQ9Y2B2 252 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 SLC25A15Q9Y619 301 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 POLEQ07864 2286 aa9.49□□□□□ -0.89
ECM1-201ENST00000346569 J3QW42 95 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 LDLRAD4O15165 306 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 C1QL1O75973 258 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 AGFG2O95081 481 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 IGLV1-44P01699 117 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 CELA3BP08861 270 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 FAHP16930 419 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 CCNOP22674 350 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 HTR2CP28335 458 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 GK2Q14410 553 aaPredicted RBP9.48□□□□□ -0.89
ECM1-201ENST00000346569 TIMM23BQ5SRD1 257 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 C1QTNF12Q5T7M4 302 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 ZBTB37Q5TC79 503 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 NCCRP1Q6ZVX7 275 aaPredicted RBP9.48□□□□□ -0.89
ECM1-201ENST00000346569 MRGPRGQ86SM5 289 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 ZNF101Q8IZC7 436 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 NKAIN3Q8N8D7 197 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 OR51D1Q8NGF3 324 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 OR6M1Q8NGM8 313 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 ZNF671Q8TAW3 534 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 LGALS14Q8TCE9 139 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 FAM3DQ96BQ1 224 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 SLC25A38Q96DW6 304 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 UQCC2Q9BRT2 126 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 CHST5Q9GZS9 411 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 CGGBP1Q9UFW8 167 aaPredicted RBP9.48□□□□□ -0.89
ECM1-201ENST00000346569 ETV7Q9Y603 341 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 TENM4Q6N022 2769 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 FAM25AB3EWG3 89 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 FAM25CB3EWG5 89 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 FAM25GB3EWG6 89 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 GMDSO60547 372 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 UPK1BO75841 260 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 ERCC1P07992 297 aaPredicted RBP9.48□□□□□ -0.89
ECM1-201ENST00000346569 ZNF35P13682 527 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 BMP5P22003 454 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 CA7P43166 264 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 FAM27E3Q08E93 113 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 PLA2G7Q13093 441 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 P2RY14Q15391 338 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 RAB11BQ15907 218 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 TBC1D28Q2M2D7 210 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 C16orf87Q6PH81 154 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 FAM131AQ6UXB0 335 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 SNX29P2Q8IUI4 249 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms