RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 GSG1Q2KHT4 349 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 TIPARPQ7Z3E1 657 aaKnown RBP11.78□□□□□ -0.52
CASC4-202ENST00000345795 DCUN1D4Q92564 292 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 GFI1Q99684 422 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 NPAP1Q9NZP6 1156 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 SHPKQ9UHJ6 478 aa11.78□□□□□ -0.52
CASC4-202ENST00000345795 RAD51DO75771 328 aa11.77□□□□□ -0.52
CASC4-202ENST00000345795 UBCP0CG48 685 aaKnown RBP11.77□□□□□ -0.52
CASC4-202ENST00000345795 ZNF44P15621 663 aa11.77□□□□□ -0.52
CASC4-202ENST00000345795 OR1C1Q15619 314 aa11.77□□□□□ -0.52
CASC4-202ENST00000345795 THEM4Q5T1C6 240 aa11.77□□□□□ -0.52
CASC4-202ENST00000345795 COMMD7Q86VX2 200 aa11.77□□□□□ -0.52
CASC4-202ENST00000345795 GJC3Q8NFK1 279 aa11.77□□□□□ -0.52
CASC4-202ENST00000345795 CST11Q9H112 138 aa11.77□□□□□ -0.52
CASC4-202ENST00000345795 PCDHGA9Q9Y5G4 932 aaKnown RBP11.77□□□□□ -0.52
CASC4-202ENST00000345795 MEGF11A6BM72 1044 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.53
CASC4-202ENST00000345795 ZNF254O75437 659 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 SC5DO75845 299 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 GLSO94925 669 aaPredicted RBP11.77□□□□□ -0.53
CASC4-202ENST00000345795 TTRP02766 147 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 ERCC1P07992 297 aaPredicted RBP11.77□□□□□ -0.53
CASC4-202ENST00000345795 SELEP16581 610 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 ATF4P18848 351 aaPredicted RBP11.77□□□□□ -0.53
CASC4-202ENST00000345795 TAS2R19P59542 299 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 EXT1Q16394 746 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 PCK2Q16822 640 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 STK35Q8TDR2 534 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 TTC9Q92623 222 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 OR2M2Q96R28 347 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 NOTCH3Q9UM47 2321 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 MAB21L2Q9Y586 359 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 KANTRA0A1W2PQU2 76 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 ANKRD34BA5PLL1 514 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 TMEM221A6NGB7 291 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 M0R296 226 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 ZNF780AO75290 641 aaPredicted RBP11.77□□□□□ -0.53
CASC4-202ENST00000345795 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
CASC4-202ENST00000345795 IFNA7P01567 189 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 HOXC12P31275 282 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 EIF1P41567 113 aaKnown RBP11.77□□□□□ -0.53
CASC4-202ENST00000345795 ZXDAP98168 799 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 SLC23A3Q6PIS1 610 aa11.77□□□□□ -0.53
CASC4-202ENST00000345795 PIEZO1Q92508 2521 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 RP2O75695 350 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 IL10RAQ13651 578 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 HLXQ14774 488 aaPredicted RBP11.76□□□□□ -0.53
CASC4-202ENST00000345795 DCAF12L2Q5VW00 463 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 RAB12Q6IQ22 244 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 LINC00114Q6XXX2 140 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 SLC25A26Q70HW3 274 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 TUSC5Q8IXB3 177 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 OR9K2Q8NGE7 335 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 EXOSC3Q9NQT5 275 aaKnown RBP11.76□□□□□ -0.53
CASC4-202ENST00000345795 ZNF319Q9P2F9 582 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 SLC7A11Q9UPY5 501 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 ATMQ13315 3056 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 XRCC3O43542 346 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 GRPP07492 148 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 UMODP07911 640 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 OPCMLQ14982 345 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 LIPHQ8WWY8 451 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 ZC3HAV1LQ96H79 300 aaKnown RBP11.76□□□□□ -0.53
CASC4-202ENST00000345795 SNX18Q96RF0 628 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 FAAP24Q9BTP7 215 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 COPZ2Q9P299 210 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 DUSP13Q9UII6 198 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 ADAP1O75689 374 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 NFYAP23511 347 aaPredicted RBP11.76□□□□□ -0.53
CASC4-202ENST00000345795 IL11RAQ14626 422 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 THOC7Q6I9Y2 204 aaKnown RBP11.76□□□□□ -0.53
CASC4-202ENST00000345795 TMEM200AQ86VY9 491 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 NUBPLQ8TB37 319 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 FGF11Q92914 225 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 DNAJB11Q9UBS4 358 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 UBQLN2Q9UHD9 624 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 LHFPL6Q9Y693 200 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 CFAP47Q6ZTR5 3102 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 ZGRF1Q86YA3 2104 aa11.76□□□□□ -0.53
CASC4-202ENST00000345795 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.75□□□□□ -0.53
CASC4-202ENST00000345795 CBR3O75828 277 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 PRH1P02810 166 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 MGMTP16455 207 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 LUMP51884 338 aaPredicted RBP11.75□□□□□ -0.53
CASC4-202ENST00000345795 PPIAP62937 165 aaKnown RBP11.75□□□□□ -0.53
CASC4-202ENST00000345795 PCOLCEQ15113 449 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 NDUFA5Q16718 116 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 DTWD2Q8NBA8 298 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 SECTM1Q8WVN6 248 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 SRXN1Q9BYN0 137 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 NMNAT2Q9BZQ4 307 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 KCNS2Q9ULS6 477 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 NKX2-8O15522 239 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms