RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MYPOPQ86VE0 399 aaPredicted RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 OR5D18Q8NGL1 313 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 OR1K1Q8NGR3 316 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 SMIM4Q8WVI0 70 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 SARAFQ96BY9 339 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 C1orf147Q96MC9 270 aaPredicted RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 METTL17Q9H7H0 456 aaPredicted RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 NCOR2Q9Y618 2525 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 K7ENP7 123 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 TOXO94900 526 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 FCER2P06734 321 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 VSIG8P0DPA2 414 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 IGHV1-2P23083 117 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 INO80CQ6PI98 192 aaPredicted RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 ANGPTL5Q86XS5 388 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 OR52H1Q8NGJ2 320 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 BCL2L2Q92843 193 aaPredicted RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 RNF170Q96K19 258 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 SLC22A4Q9H015 551 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 ATG5Q9H1Y0 275 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 OR10A2Q9H208 303 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 RBFOX1Q9NWB1 397 aaKnown RBP11.79□□□□□ -0.52
CDC42-202ENST00000344548 CRIM1Q9NZV1 1036 aa11.79□□□□□ -0.52
CDC42-202ENST00000344548 C5orf49A4QMS7 147 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 GGT3PA6NGU5 568 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 BOLA2-SMG1P6H3BVE0 249 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 CTDSPLO15194 276 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 XRCC3O43542 346 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 LYZL6O75951 148 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 NGFP01138 241 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 FCGR2AP12318 317 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 MPGP29372 298 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 GDNFP39905 211 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 PITPNAQ00169 270 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 TBR1Q16650 682 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 RTL6Q6ICC9 239 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 TMEM104Q8NE00 496 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 UPRTQ96BW1 309 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 ZNF75AQ96N20 296 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 SORCS2Q96PQ0 1159 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 CHD8Q9HCK8 2581 aa11.78□□□□□ -0.52
CDC42-202ENST00000344548 TRAV18A0A075B6X5 111 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 GSTZ1O43708 216 aaPredicted RBP11.77□□□□□ -0.52
CDC42-202ENST00000344548 APOC1P02654 83 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 SCAND1P57086 179 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 FAM3AP98173 230 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 COLCA1Q6ZS62 124 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 Q8NA96 180 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 PIGTQ969N2 578 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 GP6Q9HCN6 339 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 GPR173Q9NS66 373 aa11.77□□□□□ -0.52
CDC42-202ENST00000344548 TLN1Q9Y490 2541 aaKnown RBP11.77□□□□□ -0.53
CDC42-202ENST00000344548 MKRN2OSH3BPM6 223 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 RAD51DO75771 328 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 HCKP08631 526 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 GABRA1P14867 456 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 STOMP27105 288 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 INPP1P49441 399 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 KLF9Q13886 244 aaPredicted RBP11.77□□□□□ -0.53
CDC42-202ENST00000344548 STK11Q15831 433 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 TBRG1Q3YBR2 411 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 FAAP20Q6NZ36 180 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 PGAP1Q75T13 922 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 ZNF101Q8IZC7 436 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 NAXEQ8NCW5 288 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 NICN1Q9BSH3 213 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 C1QTNF5Q9BXJ0 243 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 CHST5Q9GZS9 411 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 POFUT1Q9H488 388 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 RAXQ9Y2V3 346 aa11.77□□□□□ -0.53
CDC42-202ENST00000344548 hCG_38984A0A1B0GV85 526 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 TNFSF13O75888 250 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 CELA3BP08861 270 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 PMPCAQ10713 525 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 KISS1Q15726 138 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 C11orf91Q3C1V1 193 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 MDP1Q86V88 176 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 TOMM5Q8N4H5 51 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 ACBD4Q8NC06 268 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 FAM215AQ9Y5M1 114 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 CACNG2Q9Y698 323 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 IGKV1-27A0A075B6S5 117 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 GABARAPH6UMI1 98 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 GMDSO60547 372 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 MT-ND4P03905 459 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 PRF1P14222 555 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 SLC6A1P30531 599 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 GSK3AP49840 483 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 HLXQ14774 488 aaPredicted RBP11.76□□□□□ -0.53
CDC42-202ENST00000344548 AWAT2Q6E213 333 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 GLIPR1L1Q6UWM5 242 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 BAIAP2L2Q6UXY1 529 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 DNM1P46Q6ZS02 220 aa11.76□□□□□ -0.53
CDC42-202ENST00000344548 DUSP18Q8NEJ0 188 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms