RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SP3Q02447 781 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 TOMM20Q15388 145 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 USF2Q15853 346 aaPredicted RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 OR5H2Q8NGV7 314 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 NPRL2Q8WTW4 380 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 GTF3AQ92664 365 aaKnown RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 C8orf44Q96CB5 159 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 OR5B2Q96R09 309 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 ADOQ96SZ5 270 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 MEGF11A6BM72 1044 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 CD37P11049 281 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 TMEM31Q5JXX7 168 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 PHF19Q5T6S3 580 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 RPUSD3Q6P087 351 aaKnown RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 OR13G1Q8NGZ3 307 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 FLVCR1-AS1Q8TAF5 88 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 RAB7BQ96AH8 199 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 OR2M4Q96R27 311 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 TAAR9Q96RI9 348 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 LMF2Q9BU23 707 aaKnown RBP13.22□□□□□ -0.29
CLCN1-201ENST00000343257 OR11A1Q9GZK7 315 aa13.22□□□□□ -0.29
CLCN1-201ENST00000343257 A0A0A6YYD4 124 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 PRSS38A1L453 326 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 DIRAS3O95661 229 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 CXCL10P02778 98 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 PNMTP11086 282 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 RNH1P13489 461 aaKnown RBP13.21□□□□□ -0.29
CLCN1-201ENST00000343257 KLK2P20151 261 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 PPM1AP35813 382 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 PLAC9Q5JTB6 97 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 TMEM268Q5VZI3 342 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 GLIPR1L1Q6UWM5 242 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 OR10A5Q9H207 317 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 EHFQ9NZC4 300 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 SEC16AO15027 2179 aa13.21□□□□□ -0.29
CLCN1-201ENST00000343257 NSA2O95478 260 aaKnown RBP13.21□□□□□ -0.3
CLCN1-201ENST00000343257 FABP4P15090 132 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 CSNK2A1P68400 391 aaPredicted RBP13.21□□□□□ -0.3
CLCN1-201ENST00000343257 SP6Q3SY56 376 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 CSNK2A3Q8NEV1 391 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 OR1J1Q8NGS3 322 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 OR52N5Q8NH56 324 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 FAM213BQ8TBF2 198 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 GPR119Q8TDV5 335 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 ZDHHC12Q96GR4 267 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 DGAT2Q96PD7 388 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 GAL3ST4Q96RP7 486 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 CHST5Q9GZS9 411 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 TCEAL2Q9H3H9 227 aaPredicted RBP13.21□□□□□ -0.3
CLCN1-201ENST00000343257 FAM60AQ9NP50 221 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 SLC17A4Q9Y2C5 497 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 HEBP2Q9Y5Z4 205 aa13.21□□□□□ -0.3
CLCN1-201ENST00000343257 SCDO00767 359 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 QDPRP09417 244 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF823P16415 610 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 PAX6P26367 422 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 CDX1P47902 265 aaPredicted RBP13.2□□□□□ -0.3
CLCN1-201ENST00000343257 DHPSP49366 369 aaPredicted RBP13.2□□□□□ -0.3
CLCN1-201ENST00000343257 CASP6P55212 293 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF542PQ5EBM4 170 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 ARHGAP5-AS1Q96IT6 56 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 SSX3Q99909 188 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 PRDM13Q9H4Q3 707 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 HRASLS2Q9NWW9 162 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 R4GMQ9 66 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF726A6NNF4 738 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 CXCL1P09341 107 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 JMJD7P0C870 316 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 MDKP21741 143 aaPredicted RBP13.2□□□□□ -0.3
CLCN1-201ENST00000343257 C1orf100Q5SVJ3 147 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 TMEM182Q6ZP80 229 aaPredicted RBP13.2□□□□□ -0.3
CLCN1-201ENST00000343257 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 SLC22A18Q96BI1 424 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 REEP6Q96HR9 211 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 G6PC2Q9NQR9 355 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 H0YIG0 161 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 SYT7O43581 403 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 NUDT21O43809 227 aaKnown RBP13.2□□□□□ -0.3
CLCN1-201ENST00000343257 CRTAPO75718 401 aaPredicted RBP13.2□□□□□ -0.3
CLCN1-201ENST00000343257 PET100P0DJ07 73 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 GIMD1P0DJR0 217 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 IL11P20809 199 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 GABRA4P48169 554 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 SSX2Q16385 188 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 THRSPQ92748 146 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 FAM212BQ9NTI7 297 aaPredicted RBP13.2□□□□□ -0.3
CLCN1-201ENST00000343257 STARD10Q9Y365 291 aa13.2□□□□□ -0.3
CLCN1-201ENST00000343257 SPAG17Q6Q759 2223 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 A0A087X0M5 115 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 TGIF2-C20orf24A0A0A6YYL0 155 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 A0A1B0GX30 115 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF264O43296 627 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 H2BFMP0C1H6 154 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF93P35789 620 aaPredicted RBP13.19□□□□□ -0.3
CLCN1-201ENST00000343257 OR3A4PP47883 348 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 NFATC4Q14934 902 aa13.19□□□□□ -0.3
CLCN1-201ENST00000343257 GAB4Q2WGN9 574 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms