RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 A0A0B4J203 849 aa15.04■□□□□ -0
CLDN4-201ENST00000340958 TALDO1P37837 337 aa15.04■□□□□ -0
CLDN4-201ENST00000340958 CLDN12P56749 244 aa15.04■□□□□ -0
CLDN4-201ENST00000340958 FAM131AQ6UXB0 335 aa15.04■□□□□ -0
CLDN4-201ENST00000340958 NCCRP1Q6ZVX7 275 aaPredicted RBP15.04■□□□□ -0
CLDN4-201ENST00000340958 NKAIN3Q8N8D7 197 aa15.04■□□□□ -0
CLDN4-201ENST00000340958 OR51A2Q8NGJ7 313 aa15.04■□□□□ -0
CLDN4-201ENST00000340958 TMEM138Q9NPI0 162 aa15.04■□□□□ -0
CLDN4-201ENST00000340958 FABP12A6NFH5 140 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 AGFG2O95081 481 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 IGLV3-1P01715 115 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 HNRNPCP07910 306 aaKnown RBP eCLIP15.03■□□□□ -0
CLDN4-201ENST00000340958 HCKP08631 526 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 FAHP16930 419 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 THBS2P35442 1172 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 DDOSTP39656 456 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 MAP2K3P46734 347 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 RIPPLY1Q0D2K3 151 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 RAB11BQ15907 218 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 ASPHD2Q6ICH7 369 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 DCDC5Q6ZRR9 648 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 CCDC190Q86UF4 302 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 MFSD4AQ8N468 514 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 WDFY2Q96P53 400 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 VKORC1Q9BQB6 163 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 MRI1Q9BV20 369 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 OR51B6Q9H340 312 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 OBP2BQ9NPH6 170 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 STEAP1Q9UHE8 339 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 V9GYS6 101 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 ZGRF1Q86YA3 2104 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 SULT1B1O43704 296 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 TMEM127O75204 238 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 CBR1P16152 277 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 THBS4P35443 961 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 ZNF92Q03936 586 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 MRPL21Q7Z2W9 205 aaKnown RBP15.03■□□□□ -0
CLDN4-201ENST00000340958 CHPT1Q8WUD6 406 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 FOXRED1Q96CU9 486 aaPredicted RBP15.03■□□□□ -0
CLDN4-201ENST00000340958 MIXL1Q9H2W2 232 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 OSGIN2Q9Y236 505 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 AMDHD2Q9Y303 409 aa15.03■□□□□ -0
CLDN4-201ENST00000340958 ESPL1Q14674 2120 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 LOC390937A0A1W2PQ73 354 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 OR5H1A6NKK0 313 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 A8MXE2 369 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 CELA3BP08861 270 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 ZNF14P17017 642 aaPredicted RBP15.02■□□□□ -0
CLDN4-201ENST00000340958 UQCRFS1P47985 274 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 MADCAM1Q13477 382 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 P2RY14Q15391 338 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 CNIH2Q6PI25 160 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 MRGPRGQ86SM5 289 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 WDR31Q8NA23 367 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 OR5L1Q8NGL2 311 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 LGALS14Q8TCE9 139 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 PP6455Q8WZ26 134 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 C10orf35Q96D05 121 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 MUCL1Q96DR8 90 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 PTTG3PQ9NZH4 202 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 CGGBP1Q9UFW8 167 aaPredicted RBP15.02■□□□□ -0
CLDN4-201ENST00000340958 SPATA2Q9UM82 520 aa15.02■□□□□ -0
CLDN4-201ENST00000340958 BAHCC1Q9P281 2608 aa15.02□□□□□ -0.01
CLDN4-201ENST00000340958 GSK3AP49840 483 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 PPP5CP53041 499 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 PRSS12P56730 875 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 COLCA1Q6ZS62 124 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 LRRC28Q86X40 367 aaPredicted RBP15.01□□□□□ -0.01
CLDN4-201ENST00000340958 GALNT11Q8NCW6 608 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 S100PBPQ96BU1 408 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 BOD1Q96IK1 185 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 SORCS2Q96PQ0 1159 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 EXTL2Q9UBQ6 330 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 MEMO1Q9Y316 297 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 INTS1Q8N201 2190 aaKnown RBP15.01□□□□□ -0.01
CLDN4-201ENST00000340958 GGT3PA6NGU5 568 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 CALCBP10092 127 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 ELK1P19419 428 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 HTR2CP28335 458 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 CD40LGP29965 261 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 ETV6P41212 452 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 IL18Q14116 193 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 CENPSQ8N2Z9 138 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 PAQR4Q8N4S7 273 aaPredicted RBP15.01□□□□□ -0.01
CLDN4-201ENST00000340958 OR52N4Q8NGI2 321 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 OR5H6Q8NGV6 325 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 GPER1Q99527 375 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 NKX3-1Q99801 234 aaPredicted RBP15.01□□□□□ -0.01
CLDN4-201ENST00000340958 STARD10Q9Y365 291 aa15.01□□□□□ -0.01
CLDN4-201ENST00000340958 DHRS7CA6NNS2 312 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 CCL21O00585 134 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 SLC17A2O00624 439 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 NGFP01138 241 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 GNLYP22749 145 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 ZNF93P35789 620 aaPredicted RBP15□□□□□ -0.01
CLDN4-201ENST00000340958 CA7P43166 264 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 FAM3AP98173 230 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 UBE2NLQ5JXB2 153 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 TIMM23BQ5SRD1 257 aa15□□□□□ -0.01
CLDN4-201ENST00000340958 STEAP2Q8NFT2 490 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms