RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 OR10A2Q9H208 303 aa11.21□□□□□ -0.61
SIRPB3P-201ENST00000340424 NIPAL2Q9H841 368 aa11.21□□□□□ -0.61
SIRPB3P-201ENST00000340424 FN3KRPQ9HA64 309 aa11.21□□□□□ -0.61
SIRPB3P-201ENST00000340424 DCAF16Q9NXF7 216 aa11.21□□□□□ -0.61
SIRPB3P-201ENST00000340424 MIOXQ9UGB7 285 aa11.21□□□□□ -0.61
SIRPB3P-201ENST00000340424 ZNF391Q9UJN7 358 aa11.21□□□□□ -0.61
SIRPB3P-201ENST00000340424 AP4S1Q9Y587 144 aa11.21□□□□□ -0.61
SIRPB3P-201ENST00000340424 ANKRD30BLA7E2S9 258 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 H0YJX3 145 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 DENRO43583 198 aaKnown RBP11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 HLA-DPB1P04440 258 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 SLC2A5P22732 501 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 CA6P23280 308 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 RPS7P62081 194 aaKnown RBP11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 MAB21L1Q13394 359 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 KCNJ8Q15842 424 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 NLRC3Q7RTR2 1065 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 PRSS45Q7RTY3 260 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 C1QL2Q7Z5L3 287 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 ZNF420Q8TAQ5 688 aaPredicted RBP11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 TSC22D3Q99576 134 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 OSBPL10Q9BXB5 764 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 TMPRSS13Q9BYE2 586 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 GABARAPL1Q9H0R8 117 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 METTL17Q9H7H0 456 aaPredicted RBP11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 TRIM36Q9NQ86 728 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 KRT84Q9NSB2 600 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 C14orf119Q9NWQ9 140 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 NDUFA13Q9P0J0 144 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 TMEM14AQ9Y6G1 99 aa11.2□□□□□ -0.62
SIRPB3P-201ENST00000340424 CEACAM18A8MTB9 384 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 TBX1O43435 398 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 CYB5R3P00387 301 aaPredicted RBP11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 SLC2A1P11166 492 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 RPS2P15880 293 aaKnown RBP11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 CALRP27797 417 aaKnown RBP11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 HSPA13P48723 471 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 SMCPP49901 116 aaPredicted RBP11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 DAPP51397 102 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 ZNF121P58317 390 aaPredicted RBP11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 LCN2P80188 198 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 PTGES3Q15185 160 aaKnown RBP11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 ZNF404Q494X3 552 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 KCTD18Q6PI47 426 aaPredicted RBP11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 DEGS2Q6QHC5 323 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 USP43Q70EL4 1123 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 SPATC1Q76KD6 591 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 SLC16A9Q7RTY1 509 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 CSNK2A3Q8NEV1 391 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 OR56B2PQ8NGI1 322 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 NANPQ8TBE9 248 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 THEM6Q8WUY1 208 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 REEP6Q96HR9 211 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 YIPF3Q9GZM5 350 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 ZFAND3Q9H8U3 227 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 ABCB9Q9NP78 766 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 TVP23BQ9NYZ1 205 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 OR5V1Q9UGF6 321 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 LAMP5Q9UJQ1 280 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
SIRPB3P-201ENST00000340424 ACOD1A6NK06 481 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 SELENOFO60613 162 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 BAG2O95816 211 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 WNT2P09544 360 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 PSMA6P60900 246 aaKnown RBP11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 FAM3AP98173 230 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 MED21Q13503 144 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 APOFQ13790 326 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 FOXB2Q5VYV0 432 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 TMEM236Q5W0B7 351 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 KDM4DQ6B0I6 523 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 DCDC5Q6ZRR9 648 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 FAM57BQ71RH2 274 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 PHC2Q8IXK0 858 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 ZNF418Q8TF45 676 aaPredicted RBP11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 PYDC1Q8WXC3 89 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 ASB17Q8WXJ9 295 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 SGK3Q96BR1 496 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 NEIL1Q96FI4 390 aaPredicted RBP11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 PGAM5Q96HS1 289 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 AMELYQ99218 206 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 MNTQ99583 582 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 TEAD3Q99594 435 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 SSBP3Q9BWW4 388 aaPredicted RBP11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 C7orf69Q9H7B7 122 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 RNF7Q9UBF6 113 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 RAB26Q9ULW5 256 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 N6AMT1Q9Y5N5 214 aa11.18□□□□□ -0.62
SIRPB3P-201ENST00000340424 STAB1Q9NY15 2570 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 LOC105371242A0A075B767 164 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 hCG_38984A0A1B0GV85 526 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 SMIM31A0A1B0GVY4 71 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 SLC22A31A6NKX4 558 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 PHYHO14832 338 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 NDUFA2O43678 99 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 FAM20BO75063 409 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 ZNF254O75437 659 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 PPIAL4GP0DN37 164 aa11.17□□□□□ -0.62
SIRPB3P-201ENST00000340424 ZNF12P17014 697 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms