RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 IGHG1P01857 330 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 CD80P33681 288 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 C17orf67Q0P5P2 114 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 OR14K1Q8NGZ2 314 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 AKR7LQ8NHP1 331 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 PAPOLGQ9BWT3 736 aaKnown RBP10.64□□□□□ -0.71
USP1-201ENST00000339950 ESRP2Q9H6T0 727 aaKnown RBP10.64□□□□□ -0.71
USP1-201ENST00000339950 IFT22Q9H7X7 185 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 EVA1AQ9H8M9 152 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 ETV7Q9Y603 341 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 PLPP3O14495 311 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 PHYHO14832 338 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 SIGLEC6O43699 453 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 OR1N1Q8NGS0 311 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 UCN2Q96RP3 112 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 SARGQ9BW04 601 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 ULBP2Q9BZM5 246 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 WNT16Q9UBV4 365 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 ZFHX2Q9C0A1 2572 aaPredicted RBP10.64□□□□□ -0.71
USP1-201ENST00000339950 FAM74A7A6NL05 159 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 LDOC1O95751 146 aaPredicted RBP10.64□□□□□ -0.71
USP1-201ENST00000339950 NMBP08949 121 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 ASAH2BP0C7U1 165 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 CPT2P23786 658 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 DEFA6Q01524 100 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 FAM74A3Q4VXF1 159 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 C6orf201Q7Z4U5 140 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 OR5L1Q8NGL2 311 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 KLK13Q9UKR3 277 aa10.64□□□□□ -0.71
USP1-201ENST00000339950 MRPS17Q9Y2R5 130 aaKnown RBP10.64□□□□□ -0.71
USP1-201ENST00000339950 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PIEZO2Q9H5I5 2752 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 SULT1B1O43704 296 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 DDAH2O95865 285 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 ICAM2P13598 275 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 ID4P47928 161 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 KCNJ3P48549 501 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 GLRX5Q86SX6 157 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 WDSUB1Q8N9V3 476 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 RNF128Q8TEB7 428 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 TCTEX1D2Q8WW35 142 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 ASB17Q8WXJ9 295 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 HOXB13Q92826 284 aaPredicted RBP10.63□□□□□ -0.71
USP1-201ENST00000339950 MARC2Q969Z3 335 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PRRT1Q99946 306 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PIGLQ9Y2B2 252 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 R4GMQ9 66 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PATE3B3GLJ2 98 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 LMO7DNF2Z398 122 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP1-201ENST00000339950 NME1P15531 152 aaKnown RBP10.63□□□□□ -0.71
USP1-201ENST00000339950 IAH1Q2TAA2 248 aaPredicted RBP10.63□□□□□ -0.71
USP1-201ENST00000339950 OGFOD3Q6PK18 319 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PPP1R3BQ86XI6 285 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 TMEM217Q8N7C4 229 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 SEMA6DQ8NFY4 1073 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 NUBPLQ8TB37 319 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 IL1F10Q8WWZ1 152 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 CHST11Q9NPF2 352 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PIPOXQ9P0Z9 390 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 FRG2CA6NGY1 282 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PIAS2O75928 621 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 GABRA1P14867 456 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 CTRB1P17538 263 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 FLI1Q01543 452 aaPredicted RBP10.63□□□□□ -0.71
USP1-201ENST00000339950 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 CTRB2Q6GPI1 263 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
USP1-201ENST00000339950 SLC22A24Q8N4F4 322 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 HGDQ93099 445 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 PCDHB10Q9UN67 800 aa10.63□□□□□ -0.71
USP1-201ENST00000339950 ZNF705GA8MUZ8 300 aaPredicted RBP10.62□□□□□ -0.71
USP1-201ENST00000339950 SHOXO15266 292 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 CNOT4O95628 575 aaKnown RBP10.62□□□□□ -0.71
USP1-201ENST00000339950 ACY1Q03154 408 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 EGR3Q06889 387 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 FAM122BQ7Z309 247 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 BPIFCQ8NFQ6 507 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 ZNF721Q8TF20 911 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 SULT4A1Q9BR01 284 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 C12orf10Q9HB07 376 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 VSIG4Q9Y279 399 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 PRELID3BQ9Y3B1 194 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 MPTX1A8MV57 137 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 ZFAND5O76080 213 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 PMS2P2O95744 297 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 POU2F2P09086 479 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 B4GALT1P15291 398 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 ZP3P21754 424 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 CSF2RBP32927 897 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 CXCL12P48061 93 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 SNTB1Q13884 538 aaKnown RBP10.62□□□□□ -0.71
USP1-201ENST00000339950 OR2W3Q7Z3T1 314 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 C9J4A7 227 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 GSTZ1O43708 216 aaPredicted RBP10.62□□□□□ -0.71
USP1-201ENST00000339950 NME2P1O60361 137 aa10.62□□□□□ -0.71
USP1-201ENST00000339950 LY86O95711 162 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms