RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 FLVCR1-AS1Q8TAF5 88 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 SECTM1Q8WVN6 248 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 S1PR3Q99500 378 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 SAP30LQ9HAJ7 183 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 TUBG2Q9NRH3 451 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 AMMECR1Q9Y4X0 333 aaPredicted RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 TRIOBPQ9H2D6 2365 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 SOX18P35713 384 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 CD79BP40259 229 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 DBPQ10586 325 aaPredicted RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 AKIRIN2Q53H80 203 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 SLC39A7Q92504 469 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 MRPS24Q96EL2 167 aaKnown RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 PELI1Q96FA3 418 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 BARX1Q9HBU1 254 aaPredicted RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 EXOGQ9Y2C4 368 aaKnown RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 TMEM30CPA0ZSE6 113 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 ZNF354AO60765 605 aaPredicted RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 MT-CO2P00403 227 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 CCL2P13500 99 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 TLE1Q04724 770 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 ZNF554Q86TJ5 538 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 UBE2FQ969M7 185 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 GP6Q9HCN6 339 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 NDUFB11Q9NX14 153 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 MRPS18CQ9Y3D5 142 aaKnown RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 ANKRD36A6QL64 1941 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 CNIH1O95406 144 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 CSF3P09919 207 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 MDH2P40926 338 aaKnown RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 GPR12P47775 334 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 CSRP3P50461 194 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 GRK1Q15835 563 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 CFAP77Q6ZQR2 320 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 GLRX5Q86SX6 157 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 OR10K1Q8NGX5 313 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 KIF25Q9UIL4 384 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 A0A1W2PNV4 684 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 GOSR2O14653 212 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 GPR137BO60478 399 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 MED6O75586 246 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 CTLA4P16410 223 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 MGAT2Q10469 447 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 HYAL4Q2M3T9 481 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 SYT6Q5T7P8 510 aaPredicted RBP8.99□□□□□ -0.97
USP54-201ENST00000339859 OTPQ5XKR4 325 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 FBXW12Q6X9E4 464 aa8.99□□□□□ -0.97
USP54-201ENST00000339859 TCF20Q9UGU0 1960 aaKnown RBP8.98□□□□□ -0.97
USP54-201ENST00000339859 HSD17B6O14756 317 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 RPS2P15880 293 aaKnown RBP8.98□□□□□ -0.97
USP54-201ENST00000339859 AGTR1P30556 359 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 METTL11BQ5VVY1 283 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 NOXA1Q86UR1 476 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 GFOD1Q9NXC2 390 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 TAS2R20P59543 309 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 DESI1Q6ICB0 168 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 APCDD1LQ8NCL9 501 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 C10orf35Q96D05 121 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 FAM234AQ9H0X4 552 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 GAL3ST2Q9H3Q3 398 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 KHDC1LQ5JSQ8 128 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 CCDC71Q8IV32 467 aaPredicted RBP8.98□□□□□ -0.97
USP54-201ENST00000339859 C20orf196Q8IYI0 205 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 CCL19Q99731 98 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 ADAM19Q9H013 955 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 TMEM210A6NLX4 147 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 IFNL4K9M1U5 179 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 CYTIPO60759 359 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 DLX5P56178 289 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 RDH5Q92781 318 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 PPP1R14DQ9NXH3 145 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 CHCHD2Q9Y6H1 151 aaPredicted RBP8.98□□□□□ -0.97
USP54-201ENST00000339859 A0A0A6YYH2 397 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 A6NJ64 397 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 GPANK1O95872 356 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 LUMP51884 338 aaPredicted RBP8.98□□□□□ -0.97
USP54-201ENST00000339859 CAV3P56539 151 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 RTP5Q14D33 572 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 RDH10Q8IZV5 341 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 PRSS35Q8N3Z0 413 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 SLC38A9Q8NBW4 561 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 TIMP4Q99727 224 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 PIMREGQ9BSJ6 248 aa8.98□□□□□ -0.97
USP54-201ENST00000339859 GAAP10253 952 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 CEBPGP53567 150 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 CD83Q01151 205 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 LRRC37A5PQ49AS3 106 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 SPICQ8N5J4 248 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 OR2AK2Q8NG84 335 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 ZPLD1Q8TCW7 415 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 OR2M2Q96R28 347 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 ST3GAL6Q9Y274 331 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 JUNBP17275 347 aaPredicted RBP8.97□□□□□ -0.97
USP54-201ENST00000339859 RPS4Y1P22090 263 aaKnown RBP8.97□□□□□ -0.97
USP54-201ENST00000339859 STX12Q86Y82 276 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 OR4D11Q8NGI4 311 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 SMAP2Q8WU79 429 aaPredicted RBP8.97□□□□□ -0.97
USP54-201ENST00000339859 MED30Q96HR3 178 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 PLEKHF2Q9H8W4 249 aa8.97□□□□□ -0.97
USP54-201ENST00000339859 SCPEP1Q9HB40 452 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms